RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 OR51G1Q8NGK1 321 aa12.27□□□□□ -0.45
NEDD4-212ENST00000557845 SLC35E1Q96K37 410 aa12.27□□□□□ -0.45
NEDD4-212ENST00000557845 CIB3Q96Q77 187 aaPredicted RBP12.27□□□□□ -0.45
NEDD4-212ENST00000557845 MAGT1Q9H0U3 335 aa12.27□□□□□ -0.45
NEDD4-212ENST00000557845 LYSTQ99698 3801 aa12.26□□□□□ -0.45
NEDD4-212ENST00000557845 IGKV1D-37A0A075B6S9 117 aa12.26□□□□□ -0.45
NEDD4-212ENST00000557845 WRBO00258 174 aa12.26□□□□□ -0.45
NEDD4-212ENST00000557845 IL7P13232 177 aa12.26□□□□□ -0.45
NEDD4-212ENST00000557845 RPP30P78346 268 aaKnown RBP12.26□□□□□ -0.45
NEDD4-212ENST00000557845 EWSR1Q01844 656 aaKnown RBP eCLIP12.26□□□□□ -0.45
NEDD4-212ENST00000557845 ZNF90Q03938 601 aa12.26□□□□□ -0.45
NEDD4-212ENST00000557845 GATAD1Q8WUU5 269 aa12.26□□□□□ -0.45
NEDD4-212ENST00000557845 C7orf50Q9BRJ6 194 aaKnown RBP12.26□□□□□ -0.45
NEDD4-212ENST00000557845 PAIP2BQ9ULR5 123 aaKnown RBP12.26□□□□□ -0.45
NEDD4-212ENST00000557845 ADAP1O75689 374 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 OR4E1P0C645 316 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 ZNF688P0C7X2 276 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 BTCP35070 178 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 ID3Q02535 119 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 DHRS2Q13268 280 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 STHQ8IWL8 128 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 RNF125Q96EQ8 232 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 RARRES2Q99969 163 aa12.25□□□□□ -0.45
NEDD4-212ENST00000557845 COQ8AQ8NI60 647 aa12.24□□□□□ -0.45
NEDD4-212ENST00000557845 PBDC1Q9BVG4 233 aa12.24□□□□□ -0.45
NEDD4-212ENST00000557845 AGRNO00468 2067 aa12.23□□□□□ -0.45
NEDD4-212ENST00000557845 SNRPGP15A8MWD9 76 aa12.23□□□□□ -0.45
NEDD4-212ENST00000557845 PRSS46E5RG02 174 aa12.23□□□□□ -0.45
NEDD4-212ENST00000557845 CA1P00915 261 aaPredicted RBP12.23□□□□□ -0.45
NEDD4-212ENST00000557845 FABP1P07148 127 aa12.23□□□□□ -0.45
NEDD4-212ENST00000557845 ATF4P18848 351 aaPredicted RBP12.23□□□□□ -0.45
NEDD4-212ENST00000557845 ANXA7P20073 488 aaKnown RBP12.23□□□□□ -0.45
NEDD4-212ENST00000557845 CNPY1Q3B7I2 92 aa12.23□□□□□ -0.45
NEDD4-212ENST00000557845 SPANXN5Q5MJ07 72 aa12.23□□□□□ -0.45
NEDD4-212ENST00000557845 SIGLEC15Q6ZMC9 328 aa12.23□□□□□ -0.45
NEDD4-212ENST00000557845 TRGV9Q99603 122 aa12.23□□□□□ -0.45
NEDD4-212ENST00000557845 HYDINQ4G0P3 5121 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 IGKV1OR2-108A0A075B7D4 117 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 KNCNA6PVL3 124 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 PLA2G10O15496 165 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 IFNA21P01568 189 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 C4orf46Q504U0 113 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 OR8G2PQ6IF36 304 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 TRPT1Q86TN4 253 aaKnown RBP12.22□□□□□ -0.45
NEDD4-212ENST00000557845 TMEM217Q8N7C4 229 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 THAP8Q8NA92 274 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 OR11H2Q8NH07 326 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 RAB40CQ96S21 281 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 SEPSECSQ9HD40 501 aaKnown RBP12.22□□□□□ -0.45
NEDD4-212ENST00000557845 NRN1Q9NPD7 142 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 PFDN2Q9UHV9 154 aa12.22□□□□□ -0.45
NEDD4-212ENST00000557845 PLECQ15149 4684 aaKnown RBP12.21□□□□□ -0.45
NEDD4-212ENST00000557845 CXorf65A6NEN9 183 aa12.21□□□□□ -0.45
NEDD4-212ENST00000557845 NUP62P37198 522 aaPredicted RBP12.21□□□□□ -0.45
NEDD4-212ENST00000557845 POLR2GP62487 172 aaKnown RBP eCLIP12.21□□□□□ -0.45
NEDD4-212ENST00000557845 OR2F1Q13607 317 aa12.21□□□□□ -0.45
NEDD4-212ENST00000557845 PSMG4Q5JS54 123 aa12.21□□□□□ -0.45
NEDD4-212ENST00000557845 OR4D5Q8NGN0 318 aa12.21□□□□□ -0.45
NEDD4-212ENST00000557845 STRAPQ9Y3F4 350 aaKnown RBP12.21□□□□□ -0.45
NEDD4-212ENST00000557845 H3BP45 60 aa12.2□□□□□ -0.46
NEDD4-212ENST00000557845 JTBO76095 146 aa12.2□□□□□ -0.46
NEDD4-212ENST00000557845 GIG44P09565 113 aaPredicted RBP12.2□□□□□ -0.46
NEDD4-212ENST00000557845 SPP1P10451 314 aa12.2□□□□□ -0.46
NEDD4-212ENST00000557845 NKX2-1P43699 371 aaPredicted RBP12.2□□□□□ -0.46
NEDD4-212ENST00000557845 LYZP61626 148 aa12.2□□□□□ -0.46
NEDD4-212ENST00000557845 SNRPD3P62318 126 aaKnown RBP12.2□□□□□ -0.46
NEDD4-212ENST00000557845 PMS2P11Q13670 270 aa12.2□□□□□ -0.46
NEDD4-212ENST00000557845 ACTL10Q5JWF8 245 aa12.2□□□□□ -0.46
NEDD4-212ENST00000557845 MORN3Q6PF18 240 aaPredicted RBP12.2□□□□□ -0.46
NEDD4-212ENST00000557845 PSENENQ9NZ42 101 aa12.2□□□□□ -0.46
NEDD4-212ENST00000557845 LYRM1O43325 122 aa12.19□□□□□ -0.46
NEDD4-212ENST00000557845 TMEM41BQ5BJD5 291 aa12.19□□□□□ -0.46
NEDD4-212ENST00000557845 C1orf194Q5T5A4 169 aa12.19□□□□□ -0.46
NEDD4-212ENST00000557845 MITD1Q8WV92 249 aa12.19□□□□□ -0.46
NEDD4-212ENST00000557845 SMIM8Q96KF7 97 aa12.19□□□□□ -0.46
NEDD4-212ENST00000557845 NUPR2A6NF83 97 aa12.18□□□□□ -0.46
NEDD4-212ENST00000557845 CFDP00746 253 aaPredicted RBP12.18□□□□□ -0.46
NEDD4-212ENST00000557845 CEMP1Q6PRD7 247 aaPredicted RBP12.18□□□□□ -0.46
NEDD4-212ENST00000557845 C20orf85Q9H1P6 137 aa12.18□□□□□ -0.46
NEDD4-212ENST00000557845 FBXL17Q9UF56 701 aa12.18□□□□□ -0.46
NEDD4-212ENST00000557845 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
NEDD4-212ENST00000557845 SSSCA1O60232 199 aa12.17□□□□□ -0.46
NEDD4-212ENST00000557845 TCRBP04435 133 aa12.17□□□□□ -0.46
NEDD4-212ENST00000557845 PAX9P55771 341 aa12.17□□□□□ -0.46
NEDD4-212ENST00000557845 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
NEDD4-212ENST00000557845 TMEM182Q6ZP80 229 aaPredicted RBP12.17□□□□□ -0.46
NEDD4-212ENST00000557845 PPP1R14BQ96C90 147 aa12.17□□□□□ -0.46
NEDD4-212ENST00000557845 C11orf68Q9H3H3 251 aaKnown RBP12.17□□□□□ -0.46
NEDD4-212ENST00000557845 DNAH1Q9P2D7 4330 aa12.17□□□□□ -0.46
NEDD4-212ENST00000557845 C4BPBP20851 252 aa12.16□□□□□ -0.46
NEDD4-212ENST00000557845 GATA2P23769 480 aaPredicted RBP12.16□□□□□ -0.46
NEDD4-212ENST00000557845 AKR1C1Q04828 323 aa12.16□□□□□ -0.46
NEDD4-212ENST00000557845 ACOT7LQ6ZUV0 252 aa12.16□□□□□ -0.46
NEDD4-212ENST00000557845 TMEM144Q7Z5S9 345 aa12.16□□□□□ -0.46
NEDD4-212ENST00000557845 OR8I2Q8N0Y5 310 aa12.16□□□□□ -0.46
NEDD4-212ENST00000557845 ZBTB8BQ8NAP8 495 aaPredicted RBP12.16□□□□□ -0.46
NEDD4-212ENST00000557845 WDR12Q9GZL7 423 aaKnown RBP12.16□□□□□ -0.46
NEDD4-212ENST00000557845 GSKIPQ9P0R6 139 aa12.16□□□□□ -0.46
NEDD4-212ENST00000557845 TRAV6A0A075B6T7 132 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 H3BMM0 161 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms