RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SSBP1Q04837 148 aaKnown RBP11.42□□□□□ -0.58
SCFD1-224ENST00000557713 NMSQ5H8A3 153 aa11.42□□□□□ -0.58
SCFD1-224ENST00000557713 GPR107Q5VW38 600 aa11.42□□□□□ -0.58
SCFD1-224ENST00000557713 ACY3Q96HD9 319 aa11.42□□□□□ -0.58
SCFD1-224ENST00000557713 HLA-DRB4X5D2U9 266 aa11.42□□□□□ -0.58
SCFD1-224ENST00000557713 ZNF705FA8MVS1 300 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-224ENST00000557713 RTL8CO15255 209 aa11.41□□□□□ -0.58
SCFD1-224ENST00000557713 GSTZ1O43708 216 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-224ENST00000557713 ZNF705DP0CH99 300 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-224ENST00000557713 ZNF705BP0CI00 300 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-224ENST00000557713 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
SCFD1-224ENST00000557713 NOXA1Q86UR1 476 aa11.41□□□□□ -0.58
SCFD1-224ENST00000557713 OR51G1Q8NGK1 321 aa11.41□□□□□ -0.58
SCFD1-224ENST00000557713 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
SCFD1-224ENST00000557713 SMIM9A6NGZ8 99 aa11.4□□□□□ -0.58
SCFD1-224ENST00000557713 DISC1C4P0D8 188 aa11.4□□□□□ -0.58
SCFD1-224ENST00000557713 MRPS10P82664 201 aaKnown RBP11.4□□□□□ -0.58
SCFD1-224ENST00000557713 CACFD1Q9UGQ2 172 aa11.4□□□□□ -0.58
SCFD1-224ENST00000557713 PRSS29PA6NIE9 313 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 M0R2N4 97 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 DEFB1P60022 68 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 LGALS9BQ3B8N2 356 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 IL22RA2Q969J5 263 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 RNF125Q96EQ8 232 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 SAV1Q9H4B6 383 aaPredicted RBP11.39□□□□□ -0.59
SCFD1-224ENST00000557713 U3KQ87 197 aa11.39□□□□□ -0.59
SCFD1-224ENST00000557713 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
SCFD1-224ENST00000557713 CTDSP2O14595 271 aa11.38□□□□□ -0.59
SCFD1-224ENST00000557713 IFNA10P01566 189 aa11.38□□□□□ -0.59
SCFD1-224ENST00000557713 MED14OSP0DP75 135 aa11.38□□□□□ -0.59
SCFD1-224ENST00000557713 KLF9Q13886 244 aaPredicted RBP11.38□□□□□ -0.59
SCFD1-224ENST00000557713 OR4C16Q8NGL9 310 aa11.38□□□□□ -0.59
SCFD1-224ENST00000557713 SMIM4Q8WVI0 70 aa11.38□□□□□ -0.59
SCFD1-224ENST00000557713 WDR12Q9GZL7 423 aaKnown RBP11.38□□□□□ -0.59
SCFD1-224ENST00000557713 PRR13Q9NZ81 148 aa11.38□□□□□ -0.59
SCFD1-224ENST00000557713 HSPB7Q9UBY9 170 aa11.38□□□□□ -0.59
SCFD1-224ENST00000557713 IGKV1D-37A0A075B6S9 117 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 SOCS3O14543 225 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 AKAIN1P0CW23 69 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 NUP62P37198 522 aaPredicted RBP11.37□□□□□ -0.59
SCFD1-224ENST00000557713 EMP1P54849 157 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 FXYD7P58549 80 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 OR8G2PQ6IF36 304 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 FOXI2Q6ZQN5 318 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 LGI3Q8N145 548 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 OR51S1Q8NGJ8 323 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 DTD1Q8TEA8 209 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 FAM210BQ96KR6 192 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 LINC00052Q96N35 136 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 RBKSQ9H477 322 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 KCNIP3Q9Y2W7 256 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
SCFD1-224ENST00000557713 RYR1P21817 5038 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 CTDSPLO15194 276 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 RGS5O15539 181 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 SMIM18P0DKX4 95 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 GPX4P36969 197 aaPredicted RBP11.36□□□□□ -0.59
SCFD1-224ENST00000557713 ID1P41134 155 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 CCR6P51684 374 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 ZNF90Q03938 601 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 GAMTQ14353 236 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 PRRT1Q99946 306 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 PBDC1Q9BVG4 233 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 DKK2Q9UBU2 259 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 PFDN2Q9UHV9 154 aa11.36□□□□□ -0.59
SCFD1-224ENST00000557713 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 ZFP92A6NM28 416 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 PSMB3P49720 205 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 ATP5IP56385 69 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-224ENST00000557713 SMCO1Q147U7 214 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 ZNF79Q15937 498 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 Q6ZR54 194 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 LYZL2Q7Z4W2 148 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 CLVS1Q8IUQ0 354 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-224ENST00000557713 SLC35B3Q9H1N7 401 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 PLA2G2EQ9NZK7 142 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
SCFD1-224ENST00000557713 ANKRD20A5PA0PJZ0 165 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 IFNA21P01568 189 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 PAX9P55771 341 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 SUPT4H1P63272 117 aaKnown RBP11.34□□□□□ -0.59
SCFD1-224ENST00000557713 OXA1LQ15070 435 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 SPATA31B1PQ5VZV4 182 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 OR4B1Q8NGF8 309 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 NIPSNAP3BQ9BS92 247 aa11.34□□□□□ -0.59
SCFD1-224ENST00000557713 TEX48A0A1B0GUV7 120 aa11.33□□□□□ -0.6
SCFD1-224ENST00000557713 PSG9Q00887 426 aa11.33□□□□□ -0.6
SCFD1-224ENST00000557713 SPCS2Q15005 226 aa11.33□□□□□ -0.6
SCFD1-224ENST00000557713 SLC35E1Q96K37 410 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms