RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 TRAV14DV4A0A0A6YYC5 116 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 FAM90A26D6RGX4 464 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 K7EPK0 472 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 BMPR1BO00238 502 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 ACTL6BO94805 426 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 PRH1P02810 166 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 OR13C7P0DN81 318 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 RNASE2P10153 161 aaKnown RBP9.54□□□□□ -0.88
TMEM260-215ENST00000557626 PSMB6P28072 239 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 NKX2-1P43699 371 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-215ENST00000557626 XGP55808 180 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 RAB32Q13637 225 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 THOC7Q6I9Y2 204 aaKnown RBP9.54□□□□□ -0.88
TMEM260-215ENST00000557626 C6orf223Q8N319 242 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 OR5T1Q8NG75 326 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 C17orf77Q96MU5 243 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 FANCD2OSQ96PS1 177 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 SRSF8Q9BRL6 282 aaKnown RBP9.54□□□□□ -0.88
TMEM260-215ENST00000557626 NMES1Q9C002 83 aa9.54□□□□□ -0.88
TMEM260-215ENST00000557626 ZNF436Q9C0F3 470 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-215ENST00000557626 DEFB131BA0A096LNP1 70 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 NPIPB5A8MRT5 1133 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 SYNGR2O43760 224 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 IAPPP10997 89 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 BCAP31P51572 246 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 CD300CQ08708 224 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 ZNF767PQ75MW2 155 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 ST6GAL2Q96JF0 529 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 MLXQ9UH92 298 aa9.53□□□□□ -0.88
TMEM260-215ENST00000557626 C15orf62A8K5M9 175 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 CEBPZOSA8MTT3 80 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 DTD1Q8TEA8 209 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 PPP1R1CQ8WVI7 109 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 USMG5Q96IX5 58 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 CSTL1Q9H114 145 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 OR5AC2Q9NZP5 309 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 LRP2P98164 4655 aa9.52□□□□□ -0.89
TMEM260-215ENST00000557626 IGLV11-55A0A075B6I3 123 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 TRBV9A0A0B4J1U6 114 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 SMLR1H3BR10 107 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 WRBO00258 174 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 SSSCA1O60232 199 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 MPC2O95563 127 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 SCGB1D2O95969 90 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 SMR3BP02814 79 aaPredicted RBP9.51□□□□□ -0.89
TMEM260-215ENST00000557626 GIPP09681 153 aaPredicted RBP9.51□□□□□ -0.89
TMEM260-215ENST00000557626 CBLN1P23435 193 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 ADMP35318 185 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 ZNF114Q8NC26 417 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 TMEM68Q96MH6 324 aa9.51□□□□□ -0.89
TMEM260-215ENST00000557626 LSM5Q9Y4Y9 91 aaKnown RBP9.51□□□□□ -0.89
TMEM260-215ENST00000557626 F11RQ9Y624 299 aaKnown RBP9.51□□□□□ -0.89
TMEM260-215ENST00000557626 PMS2P5A8MQ11 134 aa9.5□□□□□ -0.89
TMEM260-215ENST00000557626 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
TMEM260-215ENST00000557626 CCNKO75909 580 aa9.5□□□□□ -0.89
TMEM260-215ENST00000557626 HOXA1P49639 335 aaPredicted RBP9.5□□□□□ -0.89
TMEM260-215ENST00000557626 CYCSP99999 105 aaKnown RBP9.5□□□□□ -0.89
TMEM260-215ENST00000557626 MLANAQ16655 118 aa9.5□□□□□ -0.89
TMEM260-215ENST00000557626 RNF212Q495C1 297 aa9.5□□□□□ -0.89
TMEM260-215ENST00000557626 LRRC37A5PQ49AS3 106 aa9.5□□□□□ -0.89
TMEM260-215ENST00000557626 RBPMS2Q6ZRY4 209 aaKnown RBP9.5□□□□□ -0.89
TMEM260-215ENST00000557626 HSD17B13Q7Z5P4 300 aaPredicted RBP9.5□□□□□ -0.89
TMEM260-215ENST00000557626 CHRDL1Q9BU40 450 aa9.5□□□□□ -0.89
TMEM260-215ENST00000557626 PDCD10Q9BUL8 212 aa9.5□□□□□ -0.89
TMEM260-215ENST00000557626 FNDC4Q9H6D8 234 aaPredicted RBP9.5□□□□□ -0.89
TMEM260-215ENST00000557626 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
TMEM260-215ENST00000557626 LRP1Q07954 4544 aaKnown RBP9.49□□□□□ -0.89
TMEM260-215ENST00000557626 H3BP45 60 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 RAP2BP61225 183 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 ARL16Q0P5N6 197 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 C2orf83Q53S99 150 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 BTNL8Q6UX41 500 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 Q8NAQ8 132 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 OR1P1Q8NH06 330 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 BSCL2Q96G97 398 aaPredicted RBP9.49□□□□□ -0.89
TMEM260-215ENST00000557626 SCRT1Q9BWW7 348 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 MRPL36Q9P0J6 103 aaKnown RBP9.49□□□□□ -0.89
TMEM260-215ENST00000557626 CACFD1Q9UGQ2 172 aa9.49□□□□□ -0.89
TMEM260-215ENST00000557626 TRAV25A0A0B4J276 109 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 IGSF23A1L1A6 192 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 FAM24AA6NFZ4 105 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 F8W735 103 aaPredicted RBP9.48□□□□□ -0.89
TMEM260-215ENST00000557626 I3L2K1 104 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 K7EIM0 57 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 TGOLN2O43493 480 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 MED6O75586 246 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 TAS2R30P59541 319 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 S100A10P60903 97 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 ERHP84090 104 aaKnown RBP9.48□□□□□ -0.89
TMEM260-215ENST00000557626 ODF3L2Q3SX64 289 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 TMEM14EPQ6UXP3 125 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 SLC24A4Q8NFF2 622 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 OR11H4Q8NGC9 324 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 OR2T35Q8NGX2 323 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 ZNF414Q96IQ9 312 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 RAB40CQ96S21 281 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 PSENENQ9NZ42 101 aa9.48□□□□□ -0.89
TMEM260-215ENST00000557626 MBD2Q9UBB5 411 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms