RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 POU6F1Q14863 301 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 JOSD1Q15040 202 aaPredicted RBP2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 EBPQ15125 230 aaKnown RBP2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 CYHR1Q6ZMK1 362 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 OSR2Q8N2R0 312 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 TMEM86BQ8N661 226 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 ST20-AS1Q8NBB2 130 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 OR51D1Q8NGF3 324 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 Q8WTZ3 238 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 C1orf54Q8WWF1 131 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 CMBLQ96DG6 245 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 PECRQ9BY49 303 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 MED28Q9H204 178 aa2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.93□□□□□ -1.94
MTHFD1-216ENST00000557539 HEATR5BQ9P2D3 2071 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 TRAV8-1A0A0A6YYK1 113 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 C4orf51C9J302 202 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 H3BSA7 217 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 CCL22O00626 93 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 OR1I1O60431 355 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 ZNF324O75467 553 aaPredicted RBP2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 KRT75O95678 551 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 GPR75O95800 540 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 CGB3P0DN86 165 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 CGB7P0DN87 165 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 PEBP1P30086 187 aaKnown RBP2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 SULT1A1P50225 295 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 ERVS71-1P61550 626 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 HERVK_113P63121 156 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 FABP5Q01469 135 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 HIST2H3PS2Q5TEC6 136 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 NEGR1Q7Z3B1 354 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 SLC35F6Q8N357 371 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 APCDD1LQ8NCL9 501 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 MAGOHBQ96A72 148 aaKnown RBP2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 DCUN1D1Q96GG9 259 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 ABHD14BQ96IU4 210 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 HES4Q9HCC6 221 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 KLK5Q9Y337 293 aaPredicted RBP2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 S4R3C0 116 aa2.92□□□□□ -1.94
MTHFD1-216ENST00000557539 NACAE9PAV3 2078 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 A6NED7 52 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 OR51F1A6NGY5 319 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 ZNF729A6NN14 1252 aaPredicted RBP2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 A8MWP4 228 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 STK16O75716 305 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 PDYNP01213 254 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 IGKV1D-33P01593 117 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 IGKV1-33P01594 117 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SMR3BP02814 79 aaPredicted RBP2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 IGLV7-43P04211 117 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 GUSBP08236 651 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 DDTP30046 118 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 OR1E2P47887 323 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 CTBP2P56545 445 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SARNPP82979 210 aaKnown RBP2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 HIST3H3Q16695 136 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SPIN3Q5JUX0 258 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SPANXN3Q5MJ09 141 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SFXN4Q6P4A7 337 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SCIMPQ6UWF3 145 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 ADM2Q7Z4H4 148 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SGPP2Q8IWX5 399 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 C1orf174Q8IYL3 243 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 CD200R1Q8TD46 325 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 LCN9Q8WX39 176 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 YIPF5Q969M3 257 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 PRAP1Q96NZ9 151 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SDHCQ99643 169 aaPredicted RBP2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SPIN2AQ99865 258 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 SPIN2BQ9BPZ2 258 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 TMEM109Q9BVC6 243 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 FAM96AQ9H5X1 160 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 ZNF286AQ9HBT8 521 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 POPDC3Q9HBV1 291 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 PYCARDQ9ULZ3 195 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 ICOSQ9Y6W8 199 aa2.91□□□□□ -1.94
MTHFD1-216ENST00000557539 UQCRHLA0A096LP55 91 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 IGKV1-12A0A0C4DH73 117 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 A0A0J9YY10 115 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 ZNF98A6NK75 572 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 NSA2O95478 260 aaKnown RBP2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 IGKV1D-12P01611 117 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 MPC1LP0DKB6 136 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 ALOX5APP20292 161 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 PPP1CCP36873 323 aaKnown RBP2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 OR4D2P58180 307 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 LINC00313P59037 77 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 SPCS3P61009 180 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 GNG11P61952 73 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 SNRPD2P62316 118 aaKnown RBP2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 DR1Q01658 176 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 TSPAN31Q12999 210 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 EBI3Q14213 229 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 TMED2Q15363 201 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 AKIRIN2Q53H80 203 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 ACSBG2Q5FVE4 666 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 SBSNQ6UWP8 590 aa2.9□□□□□ -1.95
MTHFD1-216ENST00000557539 HIST2H3AQ71DI3 136 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms