RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 HNRNPCP07910 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
TUBB3-214ENST00000557490 RBMY1DP0C7P1 496 aaKnown RBP11.84□□□□□ -0.51
TUBB3-214ENST00000557490 TFPI2P48307 235 aa11.84□□□□□ -0.51
TUBB3-214ENST00000557490 CMC4P56277 68 aaPredicted RBP11.84□□□□□ -0.51
TUBB3-214ENST00000557490 DEFA1P59665 94 aa11.84□□□□□ -0.51
TUBB3-214ENST00000557490 DEFA3P59666 94 aa11.84□□□□□ -0.51
TUBB3-214ENST00000557490 SMIM8Q96KF7 97 aa11.84□□□□□ -0.51
TUBB3-214ENST00000557490 RCHY1Q96PM5 261 aa11.84□□□□□ -0.51
TUBB3-214ENST00000557490 RAB40CQ96S21 281 aa11.84□□□□□ -0.51
TUBB3-214ENST00000557490 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
TUBB3-214ENST00000557490 GPN1Q9HCN4 374 aaPredicted RBP11.84□□□□□ -0.51
TUBB3-214ENST00000557490 UBQLN2Q9UHD9 624 aa11.84□□□□□ -0.51
TUBB3-214ENST00000557490 DNAH7Q8WXX0 4024 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 DNASE2O00115 360 aaPredicted RBP11.83□□□□□ -0.52
TUBB3-214ENST00000557490 DFFBO76075 338 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 PSG1P11464 419 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 P2RY1P47900 373 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 CASC10Q5T4H9 136 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 LINC00322Q6ZN03 302 aaPredicted RBP11.83□□□□□ -0.52
TUBB3-214ENST00000557490 LILRB2Q8N423 598 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 GBGT1Q8N5D6 347 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 OR51G1Q8NGK1 321 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 SPATA25Q9BR10 227 aa11.83□□□□□ -0.52
TUBB3-214ENST00000557490 EIF2B2P49770 351 aaKnown RBP11.82□□□□□ -0.52
TUBB3-214ENST00000557490 TAS2R30P59541 319 aa11.82□□□□□ -0.52
TUBB3-214ENST00000557490 NRARPQ7Z6K4 114 aa11.82□□□□□ -0.52
TUBB3-214ENST00000557490 WFDC3Q8IUB2 231 aa11.82□□□□□ -0.52
TUBB3-214ENST00000557490 TRGV9Q99603 122 aa11.82□□□□□ -0.52
TUBB3-214ENST00000557490 FAM110AQ9BQ89 295 aa11.82□□□□□ -0.52
TUBB3-214ENST00000557490 PFDN2Q9UHV9 154 aa11.82□□□□□ -0.52
TUBB3-214ENST00000557490 RABAC1Q9UI14 185 aa11.82□□□□□ -0.52
TUBB3-214ENST00000557490 IGKV1D-37A0A075B6S9 117 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 LOC102724200A0A096LPH7 203 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-214ENST00000557490 PRSS46E5RG02 174 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 L7N2F9 121 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 MBPP02686 304 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-214ENST00000557490 VAMP2P63027 116 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 ZNF90Q03938 601 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 AKR1C1Q04828 323 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-214ENST00000557490 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 OR8G2PQ6IF36 304 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 GSG1LQ6UXU4 331 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 THAP8Q8NA92 274 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 RNF125Q96EQ8 232 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 C2orf50Q96LR7 162 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 PBDC1Q9BVG4 233 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 GGTLC1Q9BX51 225 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 MS4A6AQ9H2W1 248 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 U3KQE9 123 aa11.81□□□□□ -0.52
TUBB3-214ENST00000557490 TRAV2A0A0B4J234 112 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 HELTA6NFD8 242 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 SNRPGP15A8MWD9 76 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 INMT-MINDY4F8WBC2 141 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 PRAF2O60831 178 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 TSC22D2O75157 780 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 NUP62P37198 522 aaPredicted RBP11.8□□□□□ -0.52
TUBB3-214ENST00000557490 PAX9P55771 341 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 OR2F1Q13607 317 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 ACOT7LQ6ZUV0 252 aa11.8□□□□□ -0.52
TUBB3-214ENST00000557490 RCL1Q9Y2P8 373 aaKnown RBP11.8□□□□□ -0.52
TUBB3-214ENST00000557490 LSM5Q9Y4Y9 91 aaKnown RBP11.8□□□□□ -0.52
TUBB3-214ENST00000557490 SMCO3A2RU48 225 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 CFDP00746 253 aaPredicted RBP11.79□□□□□ -0.52
TUBB3-214ENST00000557490 METTL15P1P0C7V9 234 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 LYZP61626 148 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 STXBP6Q8NFX7 210 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 OR10P1Q8NGE3 313 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 CSMD3Q7Z407 3707 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 HERC2O95714 4834 aa11.79□□□□□ -0.52
TUBB3-214ENST00000557490 IGKV1OR2-108A0A075B7D4 117 aa11.78□□□□□ -0.52
TUBB3-214ENST00000557490 K7EPK0 472 aa11.78□□□□□ -0.52
TUBB3-214ENST00000557490 PVALBP20472 110 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-214ENST00000557490 BCAP31P51572 246 aa11.78□□□□□ -0.52
TUBB3-214ENST00000557490 AP2S1P53680 142 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-214ENST00000557490 TMEM144Q7Z5S9 345 aa11.78□□□□□ -0.52
TUBB3-214ENST00000557490 MAP6D1Q9H9H5 199 aa11.78□□□□□ -0.52
TUBB3-214ENST00000557490 C7orf66A4D0T2 115 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 PMS2P5A8MQ11 134 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 BUB3O43684 328 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 APOC4P55056 127 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 S100A10P60903 97 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 RRAS2P62070 204 aaPredicted RBP11.77□□□□□ -0.53
TUBB3-214ENST00000557490 DLK1P80370 383 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 APRG1Q8IVJ8 170 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 BPIFCQ8NFQ6 507 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 MUC7Q8TAX7 377 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 GLMPQ8WWB7 406 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 PPP1R14BQ96C90 147 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 MARVELD1Q9BSK0 173 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 MGAT4CQ9UBM8 478 aa11.77□□□□□ -0.53
TUBB3-214ENST00000557490 CCNKO75909 580 aa11.76□□□□□ -0.53
TUBB3-214ENST00000557490 RETNQ9HD89 108 aa11.76□□□□□ -0.53
TUBB3-214ENST00000557490 RYR1P21817 5038 aa11.75□□□□□ -0.53
TUBB3-214ENST00000557490 FNDC10F2Z333 226 aa11.75□□□□□ -0.53
TUBB3-214ENST00000557490 K7EQG2 157 aa11.75□□□□□ -0.53
TUBB3-214ENST00000557490 GOSR2O14653 212 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms