RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ABCA11PQ4W5N1 156 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 MORN2Q502X0 79 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SPRNQ5BIV9 151 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 LRRC10Q5BKY1 277 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 NMSQ5H8A3 153 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CASC10Q5T4H9 136 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SLC25A48Q6ZT89 311 aaKnown RBP2.11□□□□□ -2.07
VRK1-207ENST00000557352 TCF23Q7RTU1 214 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 LGI3Q8N145 548 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 RNF182Q8N6D2 247 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 ZNF439Q8NDP4 499 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 LY6G5BQ8NDX9 201 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 OR51G1Q8NGK1 321 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CD300LFQ8TDQ1 290 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 GLYATL2Q8WU03 294 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CAPSLQ8WWF8 208 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 RTN4IP1Q8WWV3 396 aaPredicted RBP2.11□□□□□ -2.07
VRK1-207ENST00000557352 RBPMSQ93062 196 aaKnown RBP2.11□□□□□ -2.07
VRK1-207ENST00000557352 LSM10Q969L4 123 aaKnown RBP2.11□□□□□ -2.07
VRK1-207ENST00000557352 TIMD4Q96H15 378 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 ADTRPQ96IZ2 230 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CLCC1Q96S66 551 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 HSD17B10Q99714 261 aaKnown RBP2.11□□□□□ -2.07
VRK1-207ENST00000557352 SPIN2AQ99865 258 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SPIN2BQ9BPZ2 258 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SEC22CQ9BRL7 303 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 GON7Q9BXV9 100 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 TMEM222Q9H0R3 208 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 PLEKHF2Q9H8W4 249 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 UFSP2Q9NUQ7 469 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CALYQ9NYX4 217 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 COMMD9Q9P000 198 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CLN8Q9UBY8 286 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 RPUSD1Q9UJJ7 312 aaKnown RBP2.11□□□□□ -2.07
VRK1-207ENST00000557352 MXRA5Q9NR99 2828 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CELSR1Q9NYQ6 3014 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 FBN2P35556 2912 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 IGKV1D-13A0A0B4J2D9 117 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 A0A0D9SG52 128 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 C3orf85A0A1B0GTC6 90 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 BOLA2-SMG1P6H3BVE0 249 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 M0R1W7 72 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 RAB29O14966 203 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 BET1O15155 118 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 NDUFB3O43676 98 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 PITX3O75364 302 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 PGLYRP1O75594 196 aaPredicted RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 FCN3O75636 299 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 ATP5LO75964 103 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 OR2F2O95006 317 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 MPC2O95563 127 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 CYB5R3P00387 301 aaPredicted RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 IFNA21P01568 189 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 SOD3P08294 240 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 OR5AC1P0C628 307 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 IGKV1-13P0DP09 117 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 AKR1C4P17516 323 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 NFYAP23511 347 aaPredicted RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 SSTR5P35346 364 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 CEBPDP49716 269 aaPredicted RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 EIF2B2P49770 351 aaKnown RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 DLX1P56177 255 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 DLX6P56179 175 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 ATP5IP56385 69 aaPredicted RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 TAS2R30P59541 319 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 RPL31P62899 125 aaKnown RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 OR2F1Q13607 317 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 KPRPQ5T749 579 aaPredicted RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 ZNF818PQ6ZRF7 136 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 ZNF767PQ75MW2 155 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 TMED4Q7Z7H5 227 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 PUSL1Q8N0Z8 303 aaKnown RBP2.1□□□□□ -2.07
VRK1-207ENST00000557352 C9orf62Q8N4C0 152 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 DRAM1Q8N682 238 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 FAM216BQ8N7L0 139 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 OR8B3Q8NGG8 313 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 OR2T35Q8NGX2 323 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 OR1L1Q8NH94 360 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 GRPEL2Q8TAA5 225 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 STOML3Q8TAV4 291 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 PPP1R1CQ8WVI7 109 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 MAFIPQ8WZ33 124 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 RAB1CQ92928 201 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 ARL11Q969Q4 196 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 C2orf50Q96LR7 162 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 ZNF714Q96N38 554 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 AQP10Q96PS8 301 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 OR8B2Q96RD0 313 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 TP53RKQ96S44 253 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 TMEM246Q9BRR3 403 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 IFI27L2Q9H2X8 130 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 OR2S2Q9NQN1 319 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 IDI2-AS1Q9NZ38 188 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 TNFSF18Q9UNG2 199 aa2.1□□□□□ -2.07
VRK1-207ENST00000557352 PDZD2O15018 2839 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 ACANP16112 2415 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 SONP18583 2426 aaKnown RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 TRAV14DV4A0A0A6YYC5 116 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 OOSP1A8MZH6 123 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 INS-IGF2F8WCM5 200 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms