RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 C4orf46Q504U0 113 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 STHQ8IWL8 128 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 TP53TG1Q9Y2A0 90 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 AGRNO00468 2067 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 LCE6AA0A183 80 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 CXorf65A6NEN9 183 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 KNCNA6PVL3 124 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 SYNGR2O43760 224 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 OR4E1P0C645 316 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
VSX1-207ENST00000557285 EIF2B2P49770 351 aaKnown RBP12.17□□□□□ -0.46
VSX1-207ENST00000557285 UBE2MP61081 183 aaKnown RBP12.17□□□□□ -0.46
VSX1-207ENST00000557285 SPANXN5Q5MJ07 72 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 COQ8AQ8NI60 647 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 GLMPQ8WWB7 406 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 LYSTQ99698 3801 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 U3KQE9 123 aa12.17□□□□□ -0.46
VSX1-207ENST00000557285 IGKV1D-37A0A075B6S9 117 aa12.16□□□□□ -0.46
VSX1-207ENST00000557285 HELTA6NFD8 242 aa12.16□□□□□ -0.46
VSX1-207ENST00000557285 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
VSX1-207ENST00000557285 BTCP35070 178 aa12.16□□□□□ -0.46
VSX1-207ENST00000557285 LYZP61626 148 aa12.16□□□□□ -0.46
VSX1-207ENST00000557285 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
VSX1-207ENST00000557285 NDUFA13Q9P0J0 144 aa12.16□□□□□ -0.46
VSX1-207ENST00000557285 IFNA21P01568 189 aa12.15□□□□□ -0.46
VSX1-207ENST00000557285 ATP5IP56385 69 aaPredicted RBP12.15□□□□□ -0.46
VSX1-207ENST00000557285 RPP30P78346 268 aaKnown RBP12.15□□□□□ -0.46
VSX1-207ENST00000557285 PSMG4Q5JS54 123 aa12.15□□□□□ -0.46
VSX1-207ENST00000557285 ACTL10Q5JWF8 245 aa12.15□□□□□ -0.46
VSX1-207ENST00000557285 DCANP1Q8TF63 244 aa12.15□□□□□ -0.46
VSX1-207ENST00000557285 PPP1R14BQ96C90 147 aa12.15□□□□□ -0.46
VSX1-207ENST00000557285 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
VSX1-207ENST00000557285 SSSCA1O60232 199 aa12.14□□□□□ -0.47
VSX1-207ENST00000557285 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
VSX1-207ENST00000557285 POLR2GP62487 172 aaKnown RBP eCLIP12.14□□□□□ -0.47
VSX1-207ENST00000557285 GSG1LQ6UXU4 331 aa12.14□□□□□ -0.47
VSX1-207ENST00000557285 SIGLEC15Q6ZMC9 328 aa12.14□□□□□ -0.47
VSX1-207ENST00000557285 OR11H2Q8NH07 326 aa12.14□□□□□ -0.47
VSX1-207ENST00000557285 RARRES2Q99969 163 aa12.14□□□□□ -0.47
VSX1-207ENST00000557285 C7orf50Q9BRJ6 194 aaKnown RBP12.14□□□□□ -0.47
VSX1-207ENST00000557285 BUB3O43684 328 aa12.13□□□□□ -0.47
VSX1-207ENST00000557285 FABP1P07148 127 aa12.13□□□□□ -0.47
VSX1-207ENST00000557285 AP2S1P53680 142 aaPredicted RBP12.13□□□□□ -0.47
VSX1-207ENST00000557285 STRAPQ9Y3F4 350 aaKnown RBP12.13□□□□□ -0.47
VSX1-207ENST00000557285 SMCO3A2RU48 225 aa12.12□□□□□ -0.47
VSX1-207ENST00000557285 DEFB4AO15263 64 aa12.12□□□□□ -0.47
VSX1-207ENST00000557285 JTBO76095 146 aa12.12□□□□□ -0.47
VSX1-207ENST00000557285 AKR1C1Q04828 323 aa12.12□□□□□ -0.47
VSX1-207ENST00000557285 C20orf85Q9H1P6 137 aa12.12□□□□□ -0.47
VSX1-207ENST00000557285 NRN1Q9NPD7 142 aa12.12□□□□□ -0.47
VSX1-207ENST00000557285 PSENENQ9NZ42 101 aa12.12□□□□□ -0.47
VSX1-207ENST00000557285 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
VSX1-207ENST00000557285 TRAV6A0A075B6T7 132 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 IGKV1OR2-108A0A075B7D4 117 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 SNRPGP15A8MWD9 76 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 PLA2G10O15496 165 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 LYRM1O43325 122 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
VSX1-207ENST00000557285 SNRPD3P62318 126 aaKnown RBP12.11□□□□□ -0.47
VSX1-207ENST00000557285 IAH1Q2TAA2 248 aaPredicted RBP12.11□□□□□ -0.47
VSX1-207ENST00000557285 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 ACOT7LQ6ZUV0 252 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 TRPT1Q86TN4 253 aaKnown RBP12.11□□□□□ -0.47
VSX1-207ENST00000557285 OR4D5Q8NGN0 318 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 RAB40CQ96S21 281 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 TRGV9Q99603 122 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 PFDN2Q9UHV9 154 aa12.11□□□□□ -0.47
VSX1-207ENST00000557285 HYDINQ4G0P3 5121 aa12.1□□□□□ -0.47
VSX1-207ENST00000557285 C4BPBP20851 252 aa12.1□□□□□ -0.47
VSX1-207ENST00000557285 GATA2P23769 480 aaPredicted RBP12.1□□□□□ -0.47
VSX1-207ENST00000557285 NUP62P37198 522 aaPredicted RBP12.1□□□□□ -0.47
VSX1-207ENST00000557285 ID3Q02535 119 aa12.1□□□□□ -0.47
VSX1-207ENST00000557285 TMEM217Q8N7C4 229 aa12.1□□□□□ -0.47
VSX1-207ENST00000557285 THAP8Q8NA92 274 aa12.1□□□□□ -0.47
VSX1-207ENST00000557285 CLEC5AQ9NY25 188 aa12.1□□□□□ -0.47
VSX1-207ENST00000557285 PRSS46E5RG02 174 aa12.09□□□□□ -0.47
VSX1-207ENST00000557285 CCSO14618 274 aa12.09□□□□□ -0.47
VSX1-207ENST00000557285 CCNKO75909 580 aa12.09□□□□□ -0.47
VSX1-207ENST00000557285 RRAS2P62070 204 aaPredicted RBP12.09□□□□□ -0.47
VSX1-207ENST00000557285 LINC00052Q96N35 136 aa12.09□□□□□ -0.47
VSX1-207ENST00000557285 SLC25A22Q9H936 323 aa12.09□□□□□ -0.47
VSX1-207ENST00000557285 FAM25EA8MYX2 175 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 TCRBP04435 133 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 GIG44P09565 113 aaPredicted RBP12.08□□□□□ -0.48
VSX1-207ENST00000557285 METTL15P1P0C7V9 234 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 ORM2P19652 201 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 DEFB1P60022 68 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 OR8I2Q8N0Y5 310 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 MITD1Q8WV92 249 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 SEC22CQ9BRL7 303 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 WDR12Q9GZL7 423 aaKnown RBP12.08□□□□□ -0.48
VSX1-207ENST00000557285 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 FBXL17Q9UF56 701 aa12.08□□□□□ -0.48
VSX1-207ENST00000557285 ALMS1Q8TCU4 4167 aa12.07□□□□□ -0.48
VSX1-207ENST00000557285 PLECQ15149 4684 aaKnown RBP12.07□□□□□ -0.48
VSX1-207ENST00000557285 IGKV3-20P01619 116 aa12.07□□□□□ -0.48
VSX1-207ENST00000557285 SPP1P10451 314 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms