RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 RPEL1Q2QD12 228 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 KIAA1644Q3SXP7 199 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 MRPL54Q6P161 138 aaKnown RBP15.34■□□□□ 0.05
FOXN3-214ENST00000557258 OR1L4Q8NGR5 311 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 C19orf24Q9BVV8 132 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 WNT10AQ9GZT5 417 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 PRDM13Q9H4Q3 707 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 UBTD1Q9HAC8 227 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 LOC105371242A0A075B767 164 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 A0A1W2PRE2 83 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 TPTE2P1Q5T6R2 138 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 ZNF329Q86UD4 541 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 DYNAPQ8N1N2 210 aa15.34■□□□□ 0.05
FOXN3-214ENST00000557258 F11RQ9Y624 299 aaKnown RBP15.34■□□□□ 0.05
FOXN3-214ENST00000557258 ZNF705GA8MUZ8 300 aaPredicted RBP15.33■□□□□ 0.05
FOXN3-214ENST00000557258 LY6LH3BQJ8 138 aa15.33■□□□□ 0.05
FOXN3-214ENST00000557258 ZFP36P26651 326 aaKnown RBP15.33■□□□□ 0.05
FOXN3-214ENST00000557258 RAB4BP61018 213 aa15.33■□□□□ 0.05
FOXN3-214ENST00000557258 IGF2BP2-AS1Q96M15 143 aa15.33■□□□□ 0.05
FOXN3-214ENST00000557258 ASCL2Q99929 193 aa15.33■□□□□ 0.05
FOXN3-214ENST00000557258 IBA57Q5T440 356 aaKnown RBP15.33■□□□□ 0.04
FOXN3-214ENST00000557258 C11orf71Q6IPW1 123 aa15.33■□□□□ 0.04
FOXN3-214ENST00000557258 MRPL18Q9H0U6 180 aaKnown RBP15.33■□□□□ 0.04
FOXN3-214ENST00000557258 SNURFLB1AK76 121 aa15.32■□□□□ 0.04
FOXN3-214ENST00000557258 PSG1P11464 419 aa15.32■□□□□ 0.04
FOXN3-214ENST00000557258 C22orf15Q8WYQ4 148 aa15.32■□□□□ 0.04
FOXN3-214ENST00000557258 Q71RC1 249 aaPredicted RBP15.32■□□□□ 0.04
FOXN3-214ENST00000557258 MRPL41Q8IXM3 137 aaKnown RBP15.32■□□□□ 0.04
FOXN3-214ENST00000557258 NCBP2LA6PVI3 153 aaKnown RBP15.31■□□□□ 0.04
FOXN3-214ENST00000557258 CRYGCP07315 174 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 UNQ6494/PRO21346Q6UXR6 183 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 LY6G5BQ8NDX9 201 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 DPM3Q9P2X0 92 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 IGSF10Q6WRI0 2623 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 PGPA6NDG6 321 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 SLC25A5P05141 298 aaKnown RBP15.31■□□□□ 0.04
FOXN3-214ENST00000557258 GZMBP10144 247 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 SELENOTP62341 195 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 LPAR2Q9HBW0 351 aa15.31■□□□□ 0.04
FOXN3-214ENST00000557258 MYO18BQ8IUG5 2567 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 PEX7O00628 323 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 IGHV3-23P01764 117 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 HIST1H1BP16401 226 aaKnown RBP15.3■□□□□ 0.04
FOXN3-214ENST00000557258 ETFRF1Q6IPR1 90 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 TMEM116Q8NCL8 245 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 C8orf46Q8TAG6 207 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 CACNA1AO00555 2505 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 ACACBO00763 2458 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 HYPMO75409 117 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 BAGE2Q86Y30 109 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 C19orf84I3L1E1 186 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 CORTO00230 105 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 VMO1Q7Z5L0 202 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 BCL6BQ8N143 479 aaPredicted RBP15.3■□□□□ 0.04
FOXN3-214ENST00000557258 PERPQ96FX8 193 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 BTF3L4Q96K17 158 aa15.3■□□□□ 0.04
FOXN3-214ENST00000557258 TRAV8-1A0A0A6YYK1 113 aa15.29■□□□□ 0.04
FOXN3-214ENST00000557258 NBR2O15453 112 aa15.29■□□□□ 0.04
FOXN3-214ENST00000557258 NBEAP1P0C6P0 100 aa15.29■□□□□ 0.04
FOXN3-214ENST00000557258 IGLC1P0CG04 106 aa15.29■□□□□ 0.04
FOXN3-214ENST00000557258 CFHR4Q92496 578 aa15.29■□□□□ 0.04
FOXN3-214ENST00000557258 RNF2Q99496 336 aa15.29■□□□□ 0.04
FOXN3-214ENST00000557258 TP53TG3Q9ULZ0 132 aa15.29■□□□□ 0.04
FOXN3-214ENST00000557258 ARL2-SNX15V9GYD0 113 aa15.29■□□□□ 0.04
FOXN3-214ENST00000557258 I3L2K1 104 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 GCGP01275 180 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 GPR6P46095 362 aaPredicted RBP15.28■□□□□ 0.04
FOXN3-214ENST00000557258 PDLIM4P50479 330 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 COA6Q5JTJ3 125 aaKnown RBP15.28■□□□□ 0.04
FOXN3-214ENST00000557258 TRGV9Q99603 122 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 CHODLQ9H9P2 273 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 NAT8BQ9UHF3 227 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 USP9XQ93008 2570 aaPredicted RBP15.28■□□□□ 0.04
FOXN3-214ENST00000557258 EXOC3-AS1Q8N2X6 119 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 GBGT1Q8N5D6 347 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 RASL11BQ9BPW5 248 aa15.28■□□□□ 0.04
FOXN3-214ENST00000557258 GNLYP22749 145 aa15.27■□□□□ 0.04
FOXN3-214ENST00000557258 NDPQ00604 133 aa15.27■□□□□ 0.04
FOXN3-214ENST00000557258 CDC42EP3Q9UKI2 254 aa15.27■□□□□ 0.04
FOXN3-214ENST00000557258 LY96Q9Y6Y9 160 aa15.27■□□□□ 0.04
FOXN3-214ENST00000557258 IGHV3OR16-8A0A075B7F1 116 aa15.27■□□□□ 0.03
FOXN3-214ENST00000557258 A6NNC1 897 aa15.27■□□□□ 0.03
FOXN3-214ENST00000557258 C17orf77Q96MU5 243 aa15.27■□□□□ 0.03
FOXN3-214ENST00000557258 IGKV1-17P01599 117 aa15.26■□□□□ 0.03
FOXN3-214ENST00000557258 YPEL3P61236 119 aaPredicted RBP15.26■□□□□ 0.03
FOXN3-214ENST00000557258 ZNF600Q6ZNG1 722 aa15.26■□□□□ 0.03
FOXN3-214ENST00000557258 OR11H6Q8NGC7 330 aa15.26■□□□□ 0.03
FOXN3-214ENST00000557258 K7EIM0 57 aa15.26■□□□□ 0.03
FOXN3-214ENST00000557258 GP9P14770 177 aa15.26■□□□□ 0.03
FOXN3-214ENST00000557258 UBE2G1P62253 170 aa15.26■□□□□ 0.03
FOXN3-214ENST00000557258 TMEM18Q96B42 140 aa15.26■□□□□ 0.03
FOXN3-214ENST00000557258 IGHV3-35A0A0C4DH35 117 aa15.25■□□□□ 0.03
FOXN3-214ENST00000557258 SERF1AO75920 110 aa15.25■□□□□ 0.03
FOXN3-214ENST00000557258 CRISP2P16562 243 aa15.25■□□□□ 0.03
FOXN3-214ENST00000557258 LINC00310P59036 64 aa15.25■□□□□ 0.03
FOXN3-214ENST00000557258 RBM14Q96PK6 669 aaKnown RBP15.25■□□□□ 0.03
FOXN3-214ENST00000557258 EPDR1Q9UM22 224 aa15.25■□□□□ 0.03
FOXN3-214ENST00000557258 HIGD1AQ9Y241 93 aa15.25■□□□□ 0.03
FOXN3-214ENST00000557258 SH2D7A6NKC9 451 aaPredicted RBP15.25■□□□□ 0.03
FOXN3-214ENST00000557258 JOSD1Q15040 202 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms