RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SH2D7A6NKC9 451 aaPredicted RBP12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 CDSNQ15517 529 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 RNASEKQ6P5S7 137 aaKnown RBP12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 ATOH7Q8N100 152 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 CACNG8Q8WXS5 425 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 C1orf159Q96HA4 380 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 TXNDC17Q9BRA2 123 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 DMRT1Q9Y5R6 373 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 COL27A1Q8IZC6 1860 aaPredicted RBP12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 TMEM177Q53S58 311 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 GOLT1AQ6ZVE7 132 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 CSMD1Q96PZ7 3565 aa12.35□□□□□ -0.43
TMEM55B-207ENST00000557041 IGHV3-49A0A0A0MS15 119 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 TCRBV4S1A1TA0A5B7 111 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 TPPP2P59282 170 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 IQCJQ1A5X6 159 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 EPG5Q9HCE0 2579 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 ITGB1BP1O14713 200 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 GGCTO75223 188 aaKnown RBP12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 HSBP1O75506 76 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 IL4P05112 153 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 KLRB1Q12918 225 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 TCF24Q7RTU0 167 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 EXOC3-AS1Q8N2X6 119 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 ST6GALNAC3Q8NDV1 305 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 HIGD1AQ9Y241 93 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 SIGLEC9Q9Y336 463 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 PEX7O00628 323 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 NUPR1O60356 82 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 FCN3O75636 299 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 COL8A1P27658 744 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 DDTP30046 118 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 SELENOTP62341 195 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 SORL1Q92673 2214 aa12.34□□□□□ -0.43
TMEM55B-207ENST00000557041 PRSS46E5RG02 174 aa12.33□□□□□ -0.44
TMEM55B-207ENST00000557041 F2Z2F3 143 aa12.33□□□□□ -0.44
TMEM55B-207ENST00000557041 BUB1B-PAK6H3BSN5 160 aa12.33□□□□□ -0.44
TMEM55B-207ENST00000557041 PGLYRP4Q96LB8 373 aa12.33□□□□□ -0.44
TMEM55B-207ENST00000557041 CBLN4Q9NTU7 201 aa12.33□□□□□ -0.44
TMEM55B-207ENST00000557041 PSG1P11464 419 aa12.33□□□□□ -0.44
TMEM55B-207ENST00000557041 FAM168AQ92567 244 aa12.33□□□□□ -0.44
TMEM55B-207ENST00000557041 IGHV3-66A0A0C4DH42 116 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 GZMBP10144 247 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 SELENOKQ9Y6D0 94 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 NAV2Q8IVL1 2488 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 C22orf46C9J442 243 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 BORCS7Q96B45 105 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 OR2J3O76001 311 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 ACTL10Q5JWF8 245 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 RNASEH2CQ8TDP1 164 aaKnown RBP12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 LINC00527Q9UJ94 153 aa12.32□□□□□ -0.44
TMEM55B-207ENST00000557041 IGKV3-7A0A075B6H7 116 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 SERTM2A0A1B0GWG4 89 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 NDUFS6O75380 124 aaKnown RBP12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 P01737 135 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 APCSP02743 223 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 CEACAM3P40198 252 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 PKIAP61925 76 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 TMEM30BQ3MIR4 351 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 ZNF586Q9NXT0 402 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 CORTO00230 105 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 CHEK1O14757 476 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 C3orf36Q3SXR2 165 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 UNQ6494/PRO21346Q6UXR6 183 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 MAS1LP35410 378 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 GPX4P36969 197 aaPredicted RBP12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 CA7P43166 264 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 RUSC1-AS1Q66K80 236 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
TMEM55B-207ENST00000557041 CGB1A6NKQ9 187 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 POU2AF1Q16633 256 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 SP5Q6BEB4 398 aaPredicted RBP12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 RNF2Q99496 336 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 AMY1AP04745 511 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 FOXL1Q12952 345 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 IGFL4Q6B9Z1 124 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 ZNF503Q96F45 646 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 SLC25A2Q9BXI2 301 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 A0A1B0GV90 55 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 A0A1W2PRE2 83 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 IGHV2-70P01814 119 aa12.3□□□□□ -0.44
TMEM55B-207ENST00000557041 PTPRBP23467 1997 aa12.29□□□□□ -0.44
TMEM55B-207ENST00000557041 ZNF207O43670 478 aaKnown RBP12.29□□□□□ -0.44
TMEM55B-207ENST00000557041 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
TMEM55B-207ENST00000557041 MRPL32Q9BYC8 188 aaKnown RBP12.29□□□□□ -0.44
TMEM55B-207ENST00000557041 Q9H3A6 140 aa12.29□□□□□ -0.44
TMEM55B-207ENST00000557041 NAGKQ9UJ70 344 aa12.29□□□□□ -0.44
TMEM55B-207ENST00000557041 JOSD1Q15040 202 aaPredicted RBP12.29□□□□□ -0.44
TMEM55B-207ENST00000557041 OR5R1Q8NH85 324 aa12.29□□□□□ -0.44
TMEM55B-207ENST00000557041 J3KRW8 73 aa12.28□□□□□ -0.44
TMEM55B-207ENST00000557041 G0S2P27469 103 aa12.28□□□□□ -0.44
TMEM55B-207ENST00000557041 RPL11P62913 178 aaKnown RBP12.28□□□□□ -0.44
TMEM55B-207ENST00000557041 ZNF600Q6ZNG1 722 aa12.28□□□□□ -0.44
TMEM55B-207ENST00000557041 ZNF664Q8N3J9 261 aa12.28□□□□□ -0.44
TMEM55B-207ENST00000557041 NEU1Q99519 415 aa12.28□□□□□ -0.44
TMEM55B-207ENST00000557041 OR2T8A6NH00 312 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms