RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 CYP2G1PQ6ZSU1 146 aa7.48□□□□□ -1.21
TMEM260-213ENST00000556929 GPHB5Q86YW7 130 aa7.48□□□□□ -1.21
TMEM260-213ENST00000556929 ZNF709Q8N972 641 aa7.48□□□□□ -1.21
TMEM260-213ENST00000556929 BPIFCQ8NFQ6 507 aa7.48□□□□□ -1.21
TMEM260-213ENST00000556929 OR51G1Q8NGK1 321 aa7.48□□□□□ -1.21
TMEM260-213ENST00000556929 PPP1R14BQ96C90 147 aa7.48□□□□□ -1.21
TMEM260-213ENST00000556929 RAX2Q96IS3 184 aa7.48□□□□□ -1.21
TMEM260-213ENST00000556929 PARD6GQ9BYG4 376 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-213ENST00000556929 KCNIP2Q9NS61 270 aa7.48□□□□□ -1.21
TMEM260-213ENST00000556929 LSM4Q9Y4Z0 139 aaKnown RBP7.48□□□□□ -1.21
TMEM260-213ENST00000556929 FBN1P35555 2871 aaKnown RBP7.48□□□□□ -1.21
TMEM260-213ENST00000556929 YIF1AO95070 293 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 IGKV1-17P01599 117 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 HNRNPCP07910 306 aaKnown RBP eCLIP7.47□□□□□ -1.21
TMEM260-213ENST00000556929 RD3LP0DJH9 198 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 PSG1P11464 419 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 HOXD3P31249 432 aaPredicted RBP7.47□□□□□ -1.21
TMEM260-213ENST00000556929 SLURP1P55000 103 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 ZNF90Q03938 601 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 FHL3Q13643 280 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 C1QL4Q86Z23 238 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 DUX3Q96PT4 197 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 MGST2Q99735 147 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 GINS3Q9BRX5 216 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 ZNF471Q9BX82 626 aaPredicted RBP7.47□□□□□ -1.21
TMEM260-213ENST00000556929 NPCDR1Q9BY65 106 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 WFDC1Q9HC57 220 aa7.47□□□□□ -1.21
TMEM260-213ENST00000556929 PUS1Q9Y606 427 aaKnown RBP eCLIP7.47□□□□□ -1.21
TMEM260-213ENST00000556929 IGHV3-35A0A0C4DH35 117 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 ZNF320A2RRD8 509 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 LGALS9O00182 355 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 IL4P05112 153 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 S100A7P31151 101 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 RPL29P47914 159 aaKnown RBP7.46□□□□□ -1.22
TMEM260-213ENST00000556929 OPCMLQ14982 345 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 OXLD1Q5BKU9 147 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 PXDC1Q5TGL8 231 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 RPL7L1Q6DKI1 246 aaKnown RBP7.46□□□□□ -1.22
TMEM260-213ENST00000556929 TOMM20LQ6UXN7 152 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 Q6ZRG5 221 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 REC114Q7Z4M0 266 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 C9orf62Q8N4C0 152 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 GGTLC1Q9BX51 225 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 PEMTQ9UBM1 199 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 UFC1Q9Y3C8 167 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 TIMM9Q9Y5J7 89 aa7.46□□□□□ -1.22
TMEM260-213ENST00000556929 K7EMT4 169 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 OVOL1O14753 267 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 LINC00869P0C866 280 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 TPT1P13693 172 aaKnown RBP7.45□□□□□ -1.22
TMEM260-213ENST00000556929 GATA2P23769 480 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-213ENST00000556929 ELLP55199 621 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-213ENST00000556929 SYNJ2BPP57105 145 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 KLF5Q13887 457 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-213ENST00000556929 S100A7AQ86SG5 101 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 HSD17B11Q8NBQ5 300 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 SPATA3Q8NHX4 192 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 TMEM190Q8WZ59 177 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 DLX4Q92988 240 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-213ENST00000556929 GNPNAT1Q96EK6 184 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-213ENST00000556929 RNF125Q96EQ8 232 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 PSMG3Q9BT73 122 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-213ENST00000556929 C20orf24Q9BUV8 137 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 PBDC1Q9BVG4 233 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 CYTL1Q9NRR1 136 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 PFDN2Q9UHV9 154 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 SLC45A2Q9UMX9 530 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 PXMP4Q9Y6I8 212 aa7.45□□□□□ -1.22
TMEM260-213ENST00000556929 WI2-2373I1.2A0A1W2PRP0 233 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 BOLA2-SMG1P6H3BVE0 249 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 TSPAN15O95858 294 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 ORM2P19652 201 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 ATP6V0CP27449 155 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 NKX2-5P52952 324 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-213ENST00000556929 LYZP61626 148 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 B2MP61769 119 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 MIC13Q5XKP0 118 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 LAMTOR1Q6IAA8 161 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 TMEM182Q6ZP80 229 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-213ENST00000556929 SLC51BQ86UW2 128 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 STPG3Q8N7X2 389 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 OR1L4Q8NGR5 311 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 RCC1LQ96I51 464 aaKnown RBP7.44□□□□□ -1.22
TMEM260-213ENST00000556929 NARS2Q96I59 477 aaKnown RBP7.44□□□□□ -1.22
TMEM260-213ENST00000556929 METTL26Q96S19 204 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 PFDN5Q99471 154 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 RSG1Q9BU20 258 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 ELOVL1Q9BW60 279 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 SLC39A9Q9NUM3 307 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 RABAC1Q9UI14 185 aa7.44□□□□□ -1.22
TMEM260-213ENST00000556929 ELOA3CA0A087WX78 387 aaPredicted RBP7.43□□□□□ -1.22
TMEM260-213ENST00000556929 A0A1W2PS18 150 aa7.43□□□□□ -1.22
TMEM260-213ENST00000556929 A8MWP6 167 aa7.43□□□□□ -1.22
TMEM260-213ENST00000556929 COX7A2P2O60397 106 aa7.43□□□□□ -1.22
TMEM260-213ENST00000556929 HYPMO75409 117 aa7.43□□□□□ -1.22
TMEM260-213ENST00000556929 OR5G3P0C626 314 aa7.43□□□□□ -1.22
TMEM260-213ENST00000556929 CD33P20138 364 aa7.43□□□□□ -1.22
TMEM260-213ENST00000556929 NPPCP23582 126 aa7.43□□□□□ -1.22
TMEM260-213ENST00000556929 BMI1P35226 326 aa7.43□□□□□ -1.22
TMEM260-213ENST00000556929 PLP1P60201 277 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms