RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 NKX2-1P43699 371 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-209ENST00000556909 MEF2DQ14814 521 aa13.08□□□□□ -0.32
VIPAS39-209ENST00000556909 TMEM268Q5VZI3 342 aa13.08□□□□□ -0.32
VIPAS39-209ENST00000556909 SPART-AS1P0CW21 52 aa13.07□□□□□ -0.32
VIPAS39-209ENST00000556909 PSG1P11464 419 aa13.07□□□□□ -0.32
VIPAS39-209ENST00000556909 EMP1P54849 157 aa13.07□□□□□ -0.32
VIPAS39-209ENST00000556909 DEFB1P60022 68 aa13.07□□□□□ -0.32
VIPAS39-209ENST00000556909 LGALS9BQ3B8N2 356 aa13.07□□□□□ -0.32
VIPAS39-209ENST00000556909 NMSQ5H8A3 153 aa13.07□□□□□ -0.32
VIPAS39-209ENST00000556909 GPR107Q5VW38 600 aa13.07□□□□□ -0.32
VIPAS39-209ENST00000556909 OR51G1Q8NGK1 321 aa13.07□□□□□ -0.32
VIPAS39-209ENST00000556909 TMEM189A5PLL7 270 aa13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 CRYM-AS1A6NIL9 109 aa13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 GABARAPH6UMI1 98 aa13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 GABARAPO95166 117 aa13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 IGKV3-20P01619 116 aa13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 C15orf40Q8WUR7 153 aa13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 RNF125Q96EQ8 232 aa13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 NAA50Q9GZZ1 169 aaKnown RBP13.06□□□□□ -0.32
VIPAS39-209ENST00000556909 IGHV3OR16-12A0A075B7B8 117 aa13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 SMIM9A6NGZ8 99 aa13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 NUP62P37198 522 aaPredicted RBP13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 FXYD7P58549 80 aa13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 SURF2Q15527 256 aaPredicted RBP13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 CTF1Q16619 201 aa13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 NOXA1Q86UR1 476 aa13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 WDR12Q9GZL7 423 aaKnown RBP13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 SAV1Q9H4B6 383 aaPredicted RBP13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 TMEM56-RWDD3S4R434 201 aa13.05□□□□□ -0.32
VIPAS39-209ENST00000556909 IGLV2-18A0A075B6J9 118 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 IFNA10P01566 189 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 SULT1A3P0DMM9 295 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 SULT1A4P0DMN0 295 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 SSBP1Q04837 148 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 UBE2DNLQ8IWF7 75 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 ZNF709Q8N972 641 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 FAM210BQ96KR6 192 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 PBDC1Q9BVG4 233 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 MIXL1Q9H2W2 232 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 DKK2Q9UBU2 259 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 ABCA13Q86UQ4 5058 aa13.04□□□□□ -0.32
VIPAS39-209ENST00000556909 DISC1C4P0D8 188 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 SOCS3O14543 225 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 OR8G2PQ6IF36 304 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 FOXI2Q6ZQN5 318 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 Q6ZR54 194 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 OR4C16Q8NGL9 310 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 LINC00052Q96N35 136 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 PRR13Q9NZ81 148 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 CACFD1Q9UGQ2 172 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 GPR132Q9UNW8 380 aa13.03□□□□□ -0.32
VIPAS39-209ENST00000556909 TEX48A0A1B0GUV7 120 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 IFNA21P01568 189 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 PSMB3P49720 205 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 MRPS10P82664 201 aaKnown RBP13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 KLF9Q13886 244 aaPredicted RBP13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 FAM222AQ5U5X8 452 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 LGI3Q8N145 548 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 DTD1Q8TEA8 209 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 SMIM4Q8WVI0 70 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 IL22RA2Q969J5 263 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 CLUHP3Q96NS8 147 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 SLC35B3Q9H1N7 401 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 HSPB7Q9UBY9 170 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 U3KQ87 197 aa13.02□□□□□ -0.33
VIPAS39-209ENST00000556909 IGKV1D-37A0A075B6S9 117 aa13.01□□□□□ -0.33
VIPAS39-209ENST00000556909 ID1P41134 155 aa13.01□□□□□ -0.33
VIPAS39-209ENST00000556909 ZNF90Q03938 601 aa13.01□□□□□ -0.33
VIPAS39-209ENST00000556909 ZNF79Q15937 498 aa13.01□□□□□ -0.33
VIPAS39-209ENST00000556909 OR4B1Q8NGF8 309 aa13.01□□□□□ -0.33
VIPAS39-209ENST00000556909 COQ8AQ8NI60 647 aa13.01□□□□□ -0.33
VIPAS39-209ENST00000556909 PFDN2Q9UHV9 154 aa13.01□□□□□ -0.33
VIPAS39-209ENST00000556909 ZFP92A6NM28 416 aa13□□□□□ -0.33
VIPAS39-209ENST00000556909 AKAIN1P0CW23 69 aa13□□□□□ -0.33
VIPAS39-209ENST00000556909 SUPT4H1P63272 117 aaKnown RBP13□□□□□ -0.33
VIPAS39-209ENST00000556909 GSG1LQ6UXU4 331 aa13□□□□□ -0.33
VIPAS39-209ENST00000556909 RBKSQ9H477 322 aa13□□□□□ -0.33
VIPAS39-209ENST00000556909 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
VIPAS39-209ENST00000556909 HSPG2P98160 4391 aa13□□□□□ -0.33
VIPAS39-209ENST00000556909 F6UB75 175 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 RGS5O15539 181 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 HTN3P15516 51 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 CCR6P51684 374 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 LYZP61626 148 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 GAMTQ14353 236 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 SMCO1Q147U7 214 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 OXA1LQ15070 435 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 C1orf194Q5T5A4 169 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 C1orf158Q8N1D5 194 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 OR51S1Q8NGJ8 323 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 PRRT1Q99946 306 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 GOLT1BQ9Y3E0 138 aa12.99□□□□□ -0.33
VIPAS39-209ENST00000556909 LOC102723971A0A1B0GUV8 181 aa12.98□□□□□ -0.33
VIPAS39-209ENST00000556909 SMIM18P0DKX4 95 aa12.98□□□□□ -0.33
VIPAS39-209ENST00000556909 GPX4P36969 197 aaPredicted RBP12.98□□□□□ -0.33
VIPAS39-209ENST00000556909 PAX9P55771 341 aa12.98□□□□□ -0.33
VIPAS39-209ENST00000556909 PSG9Q00887 426 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms