RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ST8SIA2Q92186 375 aa13.18□□□□□ -0.3
SHMT2-225ENST00000556798 TRGV9Q99603 122 aa13.18□□□□□ -0.3
SHMT2-225ENST00000556798 RHPN1-AS1Q9BWJ2 59 aa13.18□□□□□ -0.3
SHMT2-225ENST00000556798 PRKDCP78527 4128 aaKnown RBP13.18□□□□□ -0.3
SHMT2-225ENST00000556798 E5RGE8 158 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 CHEK1O14757 476 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 MPC2O95563 127 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 RLN2P04090 185 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 SULT1A1P50225 295 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 TMEM144Q7Z5S9 345 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 STX12Q86Y82 276 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 METTL26Q96S19 204 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 RNF2Q99496 336 aa13.17□□□□□ -0.3
SHMT2-225ENST00000556798 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
SHMT2-225ENST00000556798 NPPCP23582 126 aa13.16□□□□□ -0.3
SHMT2-225ENST00000556798 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-225ENST00000556798 TMEM182Q6ZP80 229 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-225ENST00000556798 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
SHMT2-225ENST00000556798 RNF126Q9BV68 326 aa13.16□□□□□ -0.3
SHMT2-225ENST00000556798 PBDC1Q9BVG4 233 aa13.16□□□□□ -0.3
SHMT2-225ENST00000556798 MBD2Q9UBB5 411 aa13.16□□□□□ -0.3
SHMT2-225ENST00000556798 FNDC10F2Z333 226 aa13.15□□□□□ -0.3
SHMT2-225ENST00000556798 FABP1P07148 127 aa13.15□□□□□ -0.3
SHMT2-225ENST00000556798 P2RY1P47900 373 aa13.15□□□□□ -0.3
SHMT2-225ENST00000556798 LYZP61626 148 aa13.15□□□□□ -0.3
SHMT2-225ENST00000556798 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
SHMT2-225ENST00000556798 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
SHMT2-225ENST00000556798 HNRNPCP07910 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHMT2-225ENST00000556798 PET100P0DJ07 73 aa13.14□□□□□ -0.31
SHMT2-225ENST00000556798 CRYBB3P26998 211 aa13.14□□□□□ -0.31
SHMT2-225ENST00000556798 EWSR1Q01844 656 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHMT2-225ENST00000556798 DEFB121Q5J5C9 76 aa13.14□□□□□ -0.31
SHMT2-225ENST00000556798 GGACTQ9BVM4 153 aa13.14□□□□□ -0.31
SHMT2-225ENST00000556798 VSIRQ9H7M9 311 aa13.14□□□□□ -0.31
SHMT2-225ENST00000556798 NPVFQ9HCQ7 196 aa13.14□□□□□ -0.31
SHMT2-225ENST00000556798 RABAC1Q9UI14 185 aa13.14□□□□□ -0.31
SHMT2-225ENST00000556798 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 UBE2L5PA0A1B0GUS4 154 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 BMI1P35226 326 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 NHLH2Q02577 135 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 LAMTOR1Q6IAA8 161 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 CYP2G1PQ6ZSU1 146 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 TCF24Q7RTU0 167 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 SLC25A31Q9H0C2 315 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 UQCC1Q9NVA1 299 aa13.13□□□□□ -0.31
SHMT2-225ENST00000556798 LSM4Q9Y4Z0 139 aaKnown RBP13.13□□□□□ -0.31
SHMT2-225ENST00000556798 TRAV25A0A0B4J276 109 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 DFFBO76075 338 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 CD7P09564 240 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 S100A11P31949 105 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 CD81P60033 236 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 HBG1P69891 147 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 HBG2P69892 147 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 GTSCR1Q86UQ5 136 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 Q8N1Y9 231 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 BPIFCQ8NFQ6 507 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 NARS2Q96I59 477 aaKnown RBP13.12□□□□□ -0.31
SHMT2-225ENST00000556798 TMEM147Q9BVK8 224 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 TMEM231Q9H6L2 316 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 U3KQE9 123 aa13.12□□□□□ -0.31
SHMT2-225ENST00000556798 A0A1W2PS18 150 aa13.11□□□□□ -0.31
SHMT2-225ENST00000556798 TSPAN4O14817 238 aa13.11□□□□□ -0.31
SHMT2-225ENST00000556798 GIPP09681 153 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-225ENST00000556798 VWC2Q2TAL6 325 aa13.11□□□□□ -0.31
SHMT2-225ENST00000556798 FAM90A2PQ658T7 463 aa13.11□□□□□ -0.31
SHMT2-225ENST00000556798 OR5C1Q8NGR4 320 aa13.11□□□□□ -0.31
SHMT2-225ENST00000556798 MGST2Q99735 147 aa13.11□□□□□ -0.31
SHMT2-225ENST00000556798 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-225ENST00000556798 DOK5Q9P104 306 aa13.11□□□□□ -0.31
SHMT2-225ENST00000556798 AGPAT2O15120 278 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 ORM2P19652 201 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 TFPI2P48307 235 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 EIF2B2P49770 351 aaKnown RBP13.1□□□□□ -0.31
SHMT2-225ENST00000556798 RPL11P62913 178 aaKnown RBP13.1□□□□□ -0.31
SHMT2-225ENST00000556798 BAXQ07812 192 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 CLINT1Q14677 625 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 Q5BKY6 102 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 GBGT1Q8N5D6 347 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 STPG3Q8N7X2 389 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 THAP6Q8TBB0 222 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 GRAMD2BQ96HH9 432 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 NEURL2Q9BR09 285 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 SMAD5-AS1Q9Y6J3 95 aa13.1□□□□□ -0.31
SHMT2-225ENST00000556798 LINC00869P0C866 280 aa13.09□□□□□ -0.31
SHMT2-225ENST00000556798 LYL1P12980 280 aa13.09□□□□□ -0.31
SHMT2-225ENST00000556798 C16orf54Q6UWD8 224 aa13.09□□□□□ -0.31
SHMT2-225ENST00000556798 OR1B1Q8NGR6 318 aa13.09□□□□□ -0.31
SHMT2-225ENST00000556798 GLMPQ8WWB7 406 aa13.09□□□□□ -0.31
SHMT2-225ENST00000556798 PPP1R14BQ96C90 147 aa13.09□□□□□ -0.31
SHMT2-225ENST00000556798 WDR83OSQ9Y284 106 aa13.09□□□□□ -0.31
SHMT2-225ENST00000556798 HSPB11Q9Y547 144 aa13.09□□□□□ -0.31
SHMT2-225ENST00000556798 BUB3O43684 328 aa13.08□□□□□ -0.32
SHMT2-225ENST00000556798 CFDP00746 253 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-225ENST00000556798 FGF7P21781 194 aa13.08□□□□□ -0.32
SHMT2-225ENST00000556798 RPL12P30050 165 aaKnown RBP13.08□□□□□ -0.32
SHMT2-225ENST00000556798 RAP2BP61225 183 aa13.08□□□□□ -0.32
SHMT2-225ENST00000556798 ATP6V1FQ16864 119 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms