RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 MRPL27Q9P0M9 148 aaKnown RBP7.73□□□□□ -1.17
SHMT2-224ENST00000556737 TNFSF18Q9UNG2 199 aa7.73□□□□□ -1.17
SHMT2-224ENST00000556737 STRAPQ9Y3F4 350 aaKnown RBP7.73□□□□□ -1.17
SHMT2-224ENST00000556737 IGHV3OR16-8A0A075B7F1 116 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 A0A0D9SG52 128 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 KANTRA0A1W2PQU2 76 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 IGHV3-48P01763 117 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 RNASE2P10153 161 aaKnown RBP7.72□□□□□ -1.17
SHMT2-224ENST00000556737 LYL1P12980 280 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 OR2F1Q13607 317 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 C9orf62Q8N4C0 152 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 MUC7Q8TAX7 377 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 SMIM8Q96KF7 97 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 TUBA4BQ9H853 241 aa7.72□□□□□ -1.17
SHMT2-224ENST00000556737 LYRM2Q9NU23 88 aaPredicted RBP7.72□□□□□ -1.17
SHMT2-224ENST00000556737 TRAV25A0A0B4J276 109 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 IGSF23A1L1A6 192 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 OR11H12B2RN74 326 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 C3orf84H3BNL1 204 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 K7EMT4 169 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 ZNF207O43670 478 aaKnown RBP7.71□□□□□ -1.18
SHMT2-224ENST00000556737 CST7O76096 145 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 IFNA4P05014 189 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 METTL15P1P0C7V9 234 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 CXCL2P19875 107 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 S100A11P31949 105 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 MFAP4P55083 255 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 RAB11AP62491 216 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 EWSR1Q01844 656 aaKnown RBP eCLIP7.71□□□□□ -1.18
SHMT2-224ENST00000556737 LGALSLQ3ZCW2 172 aaPredicted RBP7.71□□□□□ -1.18
SHMT2-224ENST00000556737 OR8G2PQ6IF36 304 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 TMUB2Q71RG4 321 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 LILRB2Q8N423 598 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 TMEM217Q8N7C4 229 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 SLC24A4Q8NFF2 622 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 PINX1Q96BK5 328 aaKnown RBP7.71□□□□□ -1.18
SHMT2-224ENST00000556737 TXN2Q99757 166 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 FNDC4Q9H6D8 234 aaPredicted RBP7.71□□□□□ -1.18
SHMT2-224ENST00000556737 MRPL36Q9P0J6 103 aaKnown RBP7.71□□□□□ -1.18
SHMT2-224ENST00000556737 BOLA1Q9Y3E2 137 aa7.71□□□□□ -1.18
SHMT2-224ENST00000556737 HYDINQ4G0P3 5121 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 RNF222A6NCQ9 220 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 C15orf62A8K5M9 175 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 TSPAN4O14817 238 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 TMEM50AO95807 157 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 NPY1RP25929 384 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 SULT1A1P50225 295 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 SUB1P53999 127 aaKnown RBP eCLIP7.7□□□□□ -1.18
SHMT2-224ENST00000556737 PAX9P55771 341 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 TAS2R30P59541 319 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 HBG1P69891 147 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 HBG2P69892 147 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 RELQ04864 619 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-224ENST00000556737 ZNF345Q14585 488 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 CLINT1Q14677 625 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 OPCMLQ14982 345 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 ODF3L2Q3SX64 289 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 SLC16A13Q7RTY0 426 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 KCNRGQ8N5I3 272 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 TMEM252Q8N6L7 170 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 OR1S2Q8NGQ3 325 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 AQP10Q96PS8 301 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 SPAG8Q99932 426 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-224ENST00000556737 ARPC5LQ9BPX5 153 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 C20orf24Q9BUV8 137 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 ZNF471Q9BX82 626 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-224ENST00000556737 ZFAND3Q9H8U3 227 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 GAR1Q9NY12 217 aaKnown RBP7.7□□□□□ -1.18
SHMT2-224ENST00000556737 U3KQ87 197 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 ALMS1Q8TCU4 4167 aa7.7□□□□□ -1.18
SHMT2-224ENST00000556737 DNAH1Q9P2D7 4330 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 PLECQ15149 4684 aaKnown RBP7.69□□□□□ -1.18
SHMT2-224ENST00000556737 IGHV7-4-1A0A0J9YVY3 117 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 SMCO3A2RU48 225 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 CORTO00230 105 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 NUPL2O15504 423 aaKnown RBP7.69□□□□□ -1.18
SHMT2-224ENST00000556737 BCL2L11O43521 198 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 GNG7O60262 68 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 HTR2BP41595 481 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 NHLH2Q02577 135 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 BAXQ07812 192 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 SLC38A11Q08AI6 406 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 CASC10Q5T4H9 136 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 RBPMS2Q6ZRY4 209 aaKnown RBP7.69□□□□□ -1.18
SHMT2-224ENST00000556737 OR10P1Q8NGE3 313 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 OR5C1Q8NGR4 320 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 TMEM170AQ8WVE7 144 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 FAM110AQ9BQ89 295 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 C11orf1Q9H5F2 150 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 FBXL17Q9UF56 701 aa7.69□□□□□ -1.18
SHMT2-224ENST00000556737 BORCS7-ASMTA0A0B4J1R7 106 aa7.68□□□□□ -1.18
SHMT2-224ENST00000556737 CHEK1O14757 476 aa7.68□□□□□ -1.18
SHMT2-224ENST00000556737 OPRK1P41145 380 aa7.68□□□□□ -1.18
SHMT2-224ENST00000556737 LAMTOR1Q6IAA8 161 aa7.68□□□□□ -1.18
SHMT2-224ENST00000556737 TOMM20LQ6UXN7 152 aa7.68□□□□□ -1.18
SHMT2-224ENST00000556737 TMEM14EPQ6UXP3 125 aa7.68□□□□□ -1.18
SHMT2-224ENST00000556737 RNF2Q99496 336 aa7.68□□□□□ -1.18
SHMT2-224ENST00000556737 SMPXQ9UHP9 88 aa7.68□□□□□ -1.18
SHMT2-224ENST00000556737 IGHV3-49A0A0A0MS15 119 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms