RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CELA1Q9UNI1 258 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 GPR132Q9UNW8 380 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 C3orf85A0A1B0GTC6 90 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 A0A1B0GU03 582 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 CRYM-AS1A6NIL9 109 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 SSNA1O43805 119 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 IFNA10P01566 189 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 OR4E1P0C645 316 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 ANXA7P20073 488 aaKnown RBP9.11□□□□□ -0.95
SHMT2-223ENST00000556689 HSPE1P61604 102 aaKnown RBP9.11□□□□□ -0.95
SHMT2-223ENST00000556689 PRCDQ00LT1 54 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 DHODHQ02127 395 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 ACTL10Q5JWF8 245 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 KRTAP4-5Q9BYR2 181 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 FAM212BQ9NTI7 297 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-223ENST00000556689 MUC4Q99102 2169 aa9.11□□□□□ -0.95
SHMT2-223ENST00000556689 IFNA21P01568 189 aa9.1□□□□□ -0.95
SHMT2-223ENST00000556689 IFNA17P01571 189 aa9.1□□□□□ -0.95
SHMT2-223ENST00000556689 AKR1C2P52895 323 aa9.1□□□□□ -0.95
SHMT2-223ENST00000556689 MRGPRFQ96AM1 343 aa9.1□□□□□ -0.95
SHMT2-223ENST00000556689 SEC22AQ96IW7 307 aa9.1□□□□□ -0.95
SHMT2-223ENST00000556689 METTL26Q96S19 204 aa9.1□□□□□ -0.95
SHMT2-223ENST00000556689 RAB40CQ96S21 281 aa9.1□□□□□ -0.95
SHMT2-223ENST00000556689 FLVCR2Q9UPI3 526 aa9.1□□□□□ -0.95
SHMT2-223ENST00000556689 SNRPGP15A8MWD9 76 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 SFT2D2O95562 160 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 IL5P05113 134 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 CRYBB3P26998 211 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 SNCAP37840 140 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 P2RY1P47900 373 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 DHRS2Q13268 280 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 PPP1R1AQ13522 171 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 SOHLH1Q5JUK2 328 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 LGI3Q8N145 548 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 ZNF431Q8TF32 576 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-223ENST00000556689 TMEM230Q96A57 120 aa9.09□□□□□ -0.95
SHMT2-223ENST00000556689 NARS2Q96I59 477 aaKnown RBP9.09□□□□□ -0.95
SHMT2-223ENST00000556689 RTBDNQ9BSG5 229 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-223ENST00000556689 IGLV2-18A0A075B6J9 118 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 DUXBA0A1W2PPF3 345 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 C9orf170A2RU37 121 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 IGKV1-39P01597 117 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 IGKV1D-39P04432 117 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 OR5AC1P0C628 307 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 EIF2B2P49770 351 aaKnown RBP9.08□□□□□ -0.96
SHMT2-223ENST00000556689 SUB1P53999 127 aaKnown RBP eCLIP9.08□□□□□ -0.96
SHMT2-223ENST00000556689 NUTF2P61970 127 aaKnown RBP9.08□□□□□ -0.96
SHMT2-223ENST00000556689 UBE2DNLQ8IWF7 75 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 DCANP1Q8TF63 244 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 IL22RA2Q969J5 263 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
SHMT2-223ENST00000556689 SCRT1Q9BWW7 348 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 C1QTNF4Q9BXJ3 329 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 TMEM222Q9H0R3 208 aa9.08□□□□□ -0.96
SHMT2-223ENST00000556689 CORTO00230 105 aa9.07□□□□□ -0.96
SHMT2-223ENST00000556689 SPINK9Q5DT21 86 aa9.07□□□□□ -0.96
SHMT2-223ENST00000556689 TMEM268Q5VZI3 342 aa9.07□□□□□ -0.96
SHMT2-223ENST00000556689 Q6ZR54 194 aa9.07□□□□□ -0.96
SHMT2-223ENST00000556689 ZNF575Q86XF7 245 aa9.07□□□□□ -0.96
SHMT2-223ENST00000556689 RBPMSQ93062 196 aaKnown RBP9.07□□□□□ -0.96
SHMT2-223ENST00000556689 MED28Q9H204 178 aa9.07□□□□□ -0.96
SHMT2-223ENST00000556689 PLA2G2EQ9NZK7 142 aa9.07□□□□□ -0.96
SHMT2-223ENST00000556689 XCL2Q9UBD3 114 aa9.07□□□□□ -0.96
SHMT2-223ENST00000556689 C7orf66A4D0T2 115 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 HELTA6NFD8 242 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 INS-IGF2F8WCM5 200 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 CLN5O75503 358 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 SCGB2A1O75556 95 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 SPART-AS1P0CW21 52 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 UCP1P25874 307 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 AP2S1P53680 142 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-223ENST00000556689 MLANAQ16655 118 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 PSMG4Q5JS54 123 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 FAM219AQ8IW50 185 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 C12orf45Q8N5I9 185 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-223ENST00000556689 MITD1Q8WV92 249 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 FAM210BQ96KR6 192 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 TP53RKQ96S44 253 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 SEC22CQ9BRL7 303 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 PDCD10Q9BUL8 212 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 CACFD1Q9UGQ2 172 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 ALG5Q9Y673 324 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 HSPG2P98160 4391 aa9.06□□□□□ -0.96
SHMT2-223ENST00000556689 AGRNO00468 2067 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 A0A0B4J2A0 478 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 IZUMO4Q1ZYL8 232 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 C1orf134Q5TEV5 83 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 Q6ZRM9 215 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 SLC35G3Q8N808 338 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 OR4X1Q8NH49 305 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 MRPL36Q9P0J6 103 aaKnown RBP9.05□□□□□ -0.96
SHMT2-223ENST00000556689 SHPKQ9UHJ6 478 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 TMED3Q9Y3Q3 217 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 U3KQE9 123 aa9.05□□□□□ -0.96
SHMT2-223ENST00000556689 hCG_2014768A0A024R1R8 64 aa9.04□□□□□ -0.96
SHMT2-223ENST00000556689 TRAV30A0A087WSZ9 112 aa9.04□□□□□ -0.96
SHMT2-223ENST00000556689 H3BMM0 161 aa9.04□□□□□ -0.96
SHMT2-223ENST00000556689 RNASE2P10153 161 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms