RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 FAM106AQ4KMX7 169 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 CTRB2Q6GPI1 263 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 THOC7Q6I9Y2 204 aaKnown RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF343Q6P1L6 599 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 LYZL2Q7Z4W2 148 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 LGI3Q8N145 548 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 DYNLRB2Q8TF09 96 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 RBPMSQ93062 196 aaKnown RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 LSM10Q969L4 123 aaKnown RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 CXorf58Q96LI9 332 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 SLC25A21Q9BQT8 299 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 C20orf24Q9BUV8 137 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 NDUFA4L2Q9NRX3 87 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 GSKIPQ9P0R6 139 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 ZMAT5Q9UDW3 170 aaKnown RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 CACNG5Q9UF02 275 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 AGRNO00468 2067 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 NOTCH1P46531 2555 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 TRBV9A0A0B4J1U6 114 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 A0A0G2JRQ6 117 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 FAM240BA0A1B0GVZ2 78 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 WI2-2373I1.2A0A1W2PRP0 233 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 IGLC7A0M8Q6 106 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 MFSD2BA6NFX1 497 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 FAM25EA8MYX2 175 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 LYRM1O43325 122 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 GNG7O60262 68 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 B3GALNT1O75752 331 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 SFT2D2O95562 160 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 IFNA21P01568 189 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 CRYGCP07315 174 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 SULT1A3P0DMM9 295 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 SULT1A4P0DMN0 295 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 SPNP16150 400 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 ANXA7P20073 488 aaKnown RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 UCP1P25874 307 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 EIF2B2P49770 351 aaKnown RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 SPCS3P61009 180 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 PRCDQ00LT1 54 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 PPP1R1AQ13522 171 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 KLF5Q13887 457 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 PDLIM3Q53GG5 364 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 TMEM128Q5BJH2 165 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 CST9LP1Q5W188 147 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 HSD17B13Q7Z5P4 300 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF429Q86V71 674 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 DUSP18Q8NEJ0 188 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 OR9G4Q8NGQ1 327 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 OR1L6Q8NGR2 347 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 OR5B3Q8NH48 314 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 LHFPL5Q8TAF8 219 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 MYOZ3Q8TDC0 251 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 TMEM230Q96A57 120 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 SDHCQ99643 169 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 MAGT1Q9H0U3 335 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 RBKSQ9H477 322 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 FAM212BQ9NTI7 297 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 TMEM14BQ9NUH8 114 aa3.54□□□□□ -1.84
ATXN3-243ENST00000556671 F11RQ9Y624 299 aaKnown RBP3.54□□□□□ -1.84
ATXN3-243ENST00000556671 MGAM2Q2M2H8 2515 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 IGKV3-7A0A075B6H7 116 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 IGLV11-55A0A075B6I3 123 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 IGHV3OR16-13A0A075B7E8 117 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 IGHV3-49A0A0A0MS15 119 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 IGHV3-74A0A0B4J1X5 117 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 C9orf170A2RU37 121 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 C5orf51A6NDU8 294 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 WRBO00258 174 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 PLA2G10O15496 165 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 NUPL2O15504 423 aaKnown RBP3.53□□□□□ -1.84
ATXN3-243ENST00000556671 NDUFB6O95139 128 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 MT-CO2P00403 227 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 TCRBP04435 133 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 IFNA4P05014 189 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 OR4E1P0C645 316 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 IAPPP10997 89 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 GP9P14770 177 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 OPRK1P41145 380 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 INSL3P51460 131 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 MFAP2P55001 183 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 UBE2MP61081 183 aaKnown RBP3.53□□□□□ -1.84
ATXN3-243ENST00000556671 SUPT4H1P63272 117 aaKnown RBP3.53□□□□□ -1.84
ATXN3-243ENST00000556671 SRPXP78539 464 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 SMCO1Q147U7 214 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 ANKRD55Q3KP44 614 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 WDR73Q6P4I2 378 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 AKAP14Q86UN6 197 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 FAM219AQ8IW50 185 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 OR52B4Q8NGK2 314 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 OR1P1Q8NH06 330 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 COQ8AQ8NI60 647 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 ENKURQ8TC29 256 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 VN1R17PQ8TDU5 208 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 ASCL2Q99929 193 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 C7orf50Q9BRJ6 194 aaKnown RBP3.53□□□□□ -1.84
ATXN3-243ENST00000556671 TUBA4BQ9H853 241 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 SLC2A8Q9NY64 477 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 C21orf62Q9NYP8 219 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms