RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TOX4O94842 621 aa8□□□□□ -1.13
TMEM260-211ENST00000556648 MGST1P10620 155 aaKnown RBP8□□□□□ -1.13
TMEM260-211ENST00000556648 MYCNOSP40205 109 aa8□□□□□ -1.13
TMEM260-211ENST00000556648 ERVFC1-1P60608 527 aa8□□□□□ -1.13
TMEM260-211ENST00000556648 C1orf122Q6ZSJ8 110 aa8□□□□□ -1.13
TMEM260-211ENST00000556648 OR10D4PQ8NGN7 298 aa8□□□□□ -1.13
TMEM260-211ENST00000556648 SGK494Q96LW2 274 aa8□□□□□ -1.13
TMEM260-211ENST00000556648 A0A1B0GUS0 222 aa7.99□□□□□ -1.13
TMEM260-211ENST00000556648 XKRY2A2RUG3 117 aa7.99□□□□□ -1.13
TMEM260-211ENST00000556648 S100A9P06702 114 aaKnown RBP7.99□□□□□ -1.13
TMEM260-211ENST00000556648 PLP1P60201 277 aa7.99□□□□□ -1.13
TMEM260-211ENST00000556648 RANP62826 216 aaKnown RBP7.99□□□□□ -1.13
TMEM260-211ENST00000556648 CX3CL1P78423 397 aa7.99□□□□□ -1.13
TMEM260-211ENST00000556648 FOXL1Q12952 345 aa7.99□□□□□ -1.13
TMEM260-211ENST00000556648 RBM14Q96PK6 669 aaKnown RBP7.99□□□□□ -1.13
TMEM260-211ENST00000556648 SRSF8Q9BRL6 282 aaKnown RBP7.99□□□□□ -1.13
TMEM260-211ENST00000556648 TCEAL7Q9BRU2 100 aa7.99□□□□□ -1.13
TMEM260-211ENST00000556648 NIT2Q9NQR4 276 aa7.99□□□□□ -1.13
TMEM260-211ENST00000556648 GAR1Q9NY12 217 aaKnown RBP7.99□□□□□ -1.13
TMEM260-211ENST00000556648 RPH3ALQ9UNE2 315 aa7.99□□□□□ -1.13
TMEM260-211ENST00000556648 ISLRO14498 428 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 GCGP01275 180 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 PRB4P10163 310 aaPredicted RBP7.98□□□□□ -1.13
TMEM260-211ENST00000556648 FABP4P15090 132 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 TMEM11P17152 192 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 TCL1AP56279 114 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 PYY3Q5JQD4 70 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 MINOS1Q5TGZ0 78 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 ARPC1AQ92747 370 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 FANCD2OSQ96PS1 177 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 RASL11BQ9BPW5 248 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 HIGD1AQ9Y241 93 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 TRAPPC1Q9Y5R8 145 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 MINOS1-NBL1R4GNA1 71 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 CA1P00915 261 aaPredicted RBP7.98□□□□□ -1.13
TMEM260-211ENST00000556648 IGHV3-23P01764 117 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 EGR2P11161 476 aaPredicted RBP7.98□□□□□ -1.13
TMEM260-211ENST00000556648 CBLN1P23435 193 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 S100A2P29034 98 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 RPEL1Q2QD12 228 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 CCDC144NLQ6NUI1 221 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 OR8I2Q8N0Y5 310 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 BCL6BQ8N143 479 aaPredicted RBP7.98□□□□□ -1.13
TMEM260-211ENST00000556648 HIST1H2BLQ99880 126 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 SLC25A39Q9BZJ4 359 aaPredicted RBP7.98□□□□□ -1.13
TMEM260-211ENST00000556648 PITPNC1Q9UKF7 332 aa7.98□□□□□ -1.13
TMEM260-211ENST00000556648 IGLV11-55A0A075B6I3 123 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 IGHV3OR16-10A0A075B7F0 116 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 PGPA6NDG6 321 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 SH2D7A6NKC9 451 aaPredicted RBP7.97□□□□□ -1.13
TMEM260-211ENST00000556648 F8W735 103 aaPredicted RBP7.97□□□□□ -1.13
TMEM260-211ENST00000556648 SPINK4O60575 86 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 SLC25A5P05141 298 aaKnown RBP7.97□□□□□ -1.13
TMEM260-211ENST00000556648 HIST1H1BP16401 226 aaKnown RBP7.97□□□□□ -1.13
TMEM260-211ENST00000556648 ADMP35318 185 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 SAA4P35542 130 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 CNN1P51911 297 aaKnown RBP7.97□□□□□ -1.13
TMEM260-211ENST00000556648 SLC35B1P78383 322 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 EBI3Q14213 229 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 Q71RC1 249 aaPredicted RBP7.97□□□□□ -1.13
TMEM260-211ENST00000556648 Q8N9W7 124 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 HSPB9Q9BQS6 159 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 CDC42EP3Q9UKI2 254 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 PIEZO1Q92508 2521 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 CACNA1AO00555 2505 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 CSMD1Q96PZ7 3565 aa7.97□□□□□ -1.13
TMEM260-211ENST00000556648 IGHV7-81A0A0B4J1V7 117 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 OOSP1A8MZH6 123 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 NBEAP1P0C6P0 100 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 RD3LP0DJH9 198 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 ZNF562Q6V9R5 426 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 ZNF600Q6ZNG1 722 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 TMEM183AQ8IXX5 376 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 OR1L6Q8NGR2 347 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 FAM168AQ92567 244 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 Q9H3A6 140 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 ZNF586Q9NXT0 402 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 MED13LQ71F56 2210 aa7.96□□□□□ -1.13
TMEM260-211ENST00000556648 NPIPB5A8MRT5 1133 aa7.96□□□□□ -1.14
TMEM260-211ENST00000556648 NDUFB8O95169 186 aa7.96□□□□□ -1.14
TMEM260-211ENST00000556648 AMBPP02760 352 aa7.96□□□□□ -1.14
TMEM260-211ENST00000556648 UBE2E1P51965 193 aa7.96□□□□□ -1.14
TMEM260-211ENST00000556648 TAS2R60P59551 318 aa7.96□□□□□ -1.14
TMEM260-211ENST00000556648 OSTCQ9NRP0 149 aa7.96□□□□□ -1.14
TMEM260-211ENST00000556648 MRPL27Q9P0M9 148 aaKnown RBP7.96□□□□□ -1.14
TMEM260-211ENST00000556648 EPDR1Q9UM22 224 aa7.96□□□□□ -1.14
TMEM260-211ENST00000556648 AKAP6Q13023 2319 aa7.96□□□□□ -1.14
TMEM260-211ENST00000556648 ABCA2Q9BZC7 2435 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 IGHV4-61A0A0C4DH41 118 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 TMEM8BA6NDV4 472 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 H3BRN7 92 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 OR2J3O76001 311 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 PRB1P04280 392 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 IER3P46695 156 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
TMEM260-211ENST00000556648 IBA57Q5T440 356 aaKnown RBP7.95□□□□□ -1.14
TMEM260-211ENST00000556648 BAGE2Q86Y30 109 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 EXOC3-AS1Q8N2X6 119 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 TTC9CQ8N5M4 171 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 STXBP6Q8NFX7 210 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms