RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 U3KQE9 123 aa8.58□□□□□ -1.04
SLIRP-205ENST00000556310 IGKV3-7A0A075B6H7 116 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 TRAV6A0A075B6T7 132 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 LOC102724200A0A096LPH7 203 aaPredicted RBP8.57□□□□□ -1.04
SLIRP-205ENST00000556310 TRAV2A0A0B4J234 112 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 FAM240BA0A1B0GVZ2 78 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 PRSS46E5RG02 174 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 UPK1BO75841 260 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 DFFBO76075 338 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 IL4P05112 153 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 HNRNPCP07910 306 aaKnown RBP eCLIP8.57□□□□□ -1.04
SLIRP-205ENST00000556310 RD3LP0DJH9 198 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 P2RY1P47900 373 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 GAMTQ14353 236 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 USF2Q15853 346 aaPredicted RBP8.57□□□□□ -1.04
SLIRP-205ENST00000556310 IAH1Q2TAA2 248 aaPredicted RBP8.57□□□□□ -1.04
SLIRP-205ENST00000556310 MZT2BQ6NZ67 158 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 LILRB2Q8N423 598 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 GRAMD2BQ96HH9 432 aa8.57□□□□□ -1.04
SLIRP-205ENST00000556310 PAIP2BQ9ULR5 123 aaKnown RBP8.57□□□□□ -1.04
SLIRP-205ENST00000556310 IGKV1D-37A0A075B6S9 117 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 ZFP92A6NM28 416 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 H3BP45 60 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 SSSCA1O60232 199 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 FABP1P07148 127 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 PSG1P11464 419 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 TFPI2P48307 235 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
SLIRP-205ENST00000556310 POLR2GP62487 172 aaKnown RBP eCLIP8.56□□□□□ -1.04
SLIRP-205ENST00000556310 SPANXN5Q5MJ07 72 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 GBGT1Q8N5D6 347 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 ZBTB8BQ8NAP8 495 aaPredicted RBP8.56□□□□□ -1.04
SLIRP-205ENST00000556310 OR51G1Q8NGK1 321 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 ZNF431Q8TF32 576 aaPredicted RBP8.56□□□□□ -1.04
SLIRP-205ENST00000556310 RNF125Q96EQ8 232 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 MS4A6AQ9H2W1 248 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 RETNQ9HD89 108 aa8.56□□□□□ -1.04
SLIRP-205ENST00000556310 STRAPQ9Y3F4 350 aaKnown RBP8.56□□□□□ -1.04
SLIRP-205ENST00000556310 HELTA6NFD8 242 aa8.55□□□□□ -1.04
SLIRP-205ENST00000556310 NUP62P37198 522 aaPredicted RBP8.55□□□□□ -1.04
SLIRP-205ENST00000556310 EIF2B2P49770 351 aaKnown RBP8.55□□□□□ -1.04
SLIRP-205ENST00000556310 APOC4P55056 127 aa8.55□□□□□ -1.04
SLIRP-205ENST00000556310 RPL11P62913 178 aaKnown RBP8.55□□□□□ -1.04
SLIRP-205ENST00000556310 OR8G2PQ6IF36 304 aa8.55□□□□□ -1.04
SLIRP-205ENST00000556310 THAP8Q8NA92 274 aa8.55□□□□□ -1.04
SLIRP-205ENST00000556310 TRGV9Q99603 122 aa8.55□□□□□ -1.04
SLIRP-205ENST00000556310 SEC22CQ9BRL7 303 aa8.55□□□□□ -1.04
SLIRP-205ENST00000556310 EDA2RQ9HAV5 297 aa8.55□□□□□ -1.04
SLIRP-205ENST00000556310 RABAC1Q9UI14 185 aa8.55□□□□□ -1.04
SLIRP-205ENST00000556310 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
SLIRP-205ENST00000556310 IGKV1OR2-108A0A075B7D4 117 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
SLIRP-205ENST00000556310 CCSO14618 274 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 SCGB1D2O95969 90 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 ZNF90Q03938 601 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 C16orf54Q6UWD8 224 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 ACOT7LQ6ZUV0 252 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 KIR2DL5AQ8N109 375 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 STXBP6Q8NFX7 210 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 MUC7Q8TAX7 377 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 ENKURQ8TC29 256 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 GLMPQ8WWB7 406 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 SMIM8Q96KF7 97 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 RAB40CQ96S21 281 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 PSENENQ9NZ42 101 aa8.54□□□□□ -1.04
SLIRP-205ENST00000556310 RCL1Q9Y2P8 373 aaKnown RBP8.54□□□□□ -1.04
SLIRP-205ENST00000556310 C3orf84H3BNL1 204 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 K7EQG2 157 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 BUB3O43684 328 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 TSC22D2O75157 780 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 IL5P05113 134 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 PAX9P55771 341 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 TAS2R30P59541 319 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 IFITM3Q01628 133 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 AKR1C1Q04828 323 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 TMEM14EPQ6UXP3 125 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 WFDC3Q8IUB2 231 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 APRG1Q8IVJ8 170 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 C12orf45Q8N5I9 185 aaPredicted RBP8.53□□□□□ -1.04
SLIRP-205ENST00000556310 PBDC1Q9BVG4 233 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 GSKIPQ9P0R6 139 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 PFDN2Q9UHV9 154 aa8.53□□□□□ -1.04
SLIRP-205ENST00000556310 PMS2P5A8MQ11 134 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 SNRPGP15A8MWD9 76 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 FAM25EA8MYX2 175 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 UBE2CO00762 179 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 CFDP00746 253 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-205ENST00000556310 MBPP02686 304 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-205ENST00000556310 AP2S1P53680 142 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-205ENST00000556310 LYZP61626 148 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 ZNF124Q15973 351 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 Q6ZWC4 215 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 FAM24BQ8N5W8 94 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 DCANP1Q8TF63 244 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms