RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 IL18Q14116 193 aa13.56□□□□□ -0.24
CDKN3-209ENST00000556102 CLVS1Q8IUQ0 354 aaPredicted RBP13.56□□□□□ -0.24
CDKN3-209ENST00000556102 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
CDKN3-209ENST00000556102 U3KQ87 197 aa13.56□□□□□ -0.24
CDKN3-209ENST00000556102 AMBPP02760 352 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 CCR6P51684 374 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 SPCS2Q15005 226 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 C12orf74Q32Q52 190 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 GPR141Q7Z602 305 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 DIRAS2Q96HU8 199 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 PRR13Q9NZ81 148 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 HSPB7Q9UBY9 170 aa13.55□□□□□ -0.24
CDKN3-209ENST00000556102 DEFB131BA0A096LNP1 70 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 ANKRD20A5PA0PJZ0 165 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 HLA-DRB4P13762 266 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 NKX2-1P43699 371 aaPredicted RBP13.54□□□□□ -0.24
CDKN3-209ENST00000556102 SMCO1Q147U7 214 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 LGI3Q8N145 548 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 DTD1Q8TEA8 209 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 RNF125Q96EQ8 232 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 SCGB3A2Q96PL1 93 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 MRPS26Q9BYN8 205 aaKnown RBP13.54□□□□□ -0.24
CDKN3-209ENST00000556102 SCP2D1Q9UJQ7 156 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 HLA-DRB4X5D2U9 266 aa13.54□□□□□ -0.24
CDKN3-209ENST00000556102 A0A0B4J2A0 478 aa13.53□□□□□ -0.24
CDKN3-209ENST00000556102 ALDH3B2P48448 385 aa13.53□□□□□ -0.24
CDKN3-209ENST00000556102 KLF9Q13886 244 aaPredicted RBP13.53□□□□□ -0.24
CDKN3-209ENST00000556102 OR8G2PQ6IF36 304 aa13.53□□□□□ -0.24
CDKN3-209ENST00000556102 ZNF767PQ75MW2 155 aa13.53□□□□□ -0.24
CDKN3-209ENST00000556102 SHPKQ9UHJ6 478 aa13.53□□□□□ -0.24
CDKN3-209ENST00000556102 PFDN2Q9UHV9 154 aa13.53□□□□□ -0.24
CDKN3-209ENST00000556102 KIAA1109Q2LD37 5005 aa13.52□□□□□ -0.24
CDKN3-209ENST00000556102 ATP5IP56385 69 aaPredicted RBP13.52□□□□□ -0.25
CDKN3-209ENST00000556102 NEU1Q99519 415 aa13.52□□□□□ -0.25
CDKN3-209ENST00000556102 PBDC1Q9BVG4 233 aa13.52□□□□□ -0.25
CDKN3-209ENST00000556102 RBKSQ9H477 322 aa13.52□□□□□ -0.25
CDKN3-209ENST00000556102 CCDC59Q9P031 241 aaKnown RBP13.52□□□□□ -0.25
CDKN3-209ENST00000556102 ZFP92A6NM28 416 aa13.51□□□□□ -0.25
CDKN3-209ENST00000556102 GPX4P36969 197 aaPredicted RBP13.51□□□□□ -0.25
CDKN3-209ENST00000556102 SUPT4H1P63272 117 aaKnown RBP13.51□□□□□ -0.25
CDKN3-209ENST00000556102 ZNF705AQ6ZN79 300 aaPredicted RBP13.51□□□□□ -0.25
CDKN3-209ENST00000556102 LINC00336Q6ZUF6 198 aa13.51□□□□□ -0.25
CDKN3-209ENST00000556102 LYZL2Q7Z4W2 148 aa13.51□□□□□ -0.25
CDKN3-209ENST00000556102 SLC35E1Q96K37 410 aa13.51□□□□□ -0.25
CDKN3-209ENST00000556102 FAT2Q9NYQ8 4349 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 P0DMU3 169 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 FAM231AP0DMU4 169 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 FAM231CP0DMU5 169 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 ANXA3P12429 323 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 AKR1C4P17516 323 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 ID1P41134 155 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 SRPXP78539 464 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 GAMTQ14353 236 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 GDF5OSQ5U4N7 250 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 DYNC2LI1Q8TCX1 351 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 NDUFAF3Q9BU61 184 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 WDR12Q9GZL7 423 aaKnown RBP13.5□□□□□ -0.25
CDKN3-209ENST00000556102 MCUBQ9NWR8 336 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 RSL24D1Q9UHA3 163 aaKnown RBP13.5□□□□□ -0.25
CDKN3-209ENST00000556102 DNAH17Q9UFH2 4485 aa13.5□□□□□ -0.25
CDKN3-209ENST00000556102 IGKV1D-37A0A075B6S9 117 aa13.49□□□□□ -0.25
CDKN3-209ENST00000556102 ZNF705FA8MVS1 300 aaPredicted RBP13.49□□□□□ -0.25
CDKN3-209ENST00000556102 ZNF705DP0CH99 300 aaPredicted RBP13.49□□□□□ -0.25
CDKN3-209ENST00000556102 ZNF705BP0CI00 300 aaPredicted RBP13.49□□□□□ -0.25
CDKN3-209ENST00000556102 PSMB3P49720 205 aa13.49□□□□□ -0.25
CDKN3-209ENST00000556102 DEFB1P60022 68 aa13.49□□□□□ -0.25
CDKN3-209ENST00000556102 ZNF90Q03938 601 aa13.49□□□□□ -0.25
CDKN3-209ENST00000556102 FOXI2Q6ZQN5 318 aa13.49□□□□□ -0.25
CDKN3-209ENST00000556102 OR1S1Q8NH92 325 aa13.49□□□□□ -0.25
CDKN3-209ENST00000556102 RAB2BQ8WUD1 216 aa13.49□□□□□ -0.25
CDKN3-209ENST00000556102 LINC00052Q96N35 136 aa13.49□□□□□ -0.25
CDKN3-209ENST00000556102 SAV1Q9H4B6 383 aaPredicted RBP13.49□□□□□ -0.25
CDKN3-209ENST00000556102 DNAH2Q9P225 4427 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 TMEM189A5PLL7 270 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 SMIM9A6NGZ8 99 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 IGKV3-20P01619 116 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 FABP1P07148 127 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 LYZP61626 148 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 C1orf194Q5T5A4 169 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 POM121L12Q8N7R1 296 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 CLUHP3Q96NS8 147 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 SCRT1Q9BWW7 348 aa13.48□□□□□ -0.25
CDKN3-209ENST00000556102 PIGBOS1A0A0B4J2F0 54 aa13.47□□□□□ -0.25
CDKN3-209ENST00000556102 SOCS3O14543 225 aa13.47□□□□□ -0.25
CDKN3-209ENST00000556102 SPART-AS1P0CW21 52 aa13.47□□□□□ -0.25
CDKN3-209ENST00000556102 FXYD7P58549 80 aa13.47□□□□□ -0.25
CDKN3-209ENST00000556102 COQ8AQ8NI60 647 aa13.47□□□□□ -0.25
CDKN3-209ENST00000556102 BCL7BQ9BQE9 202 aa13.47□□□□□ -0.25
CDKN3-209ENST00000556102 IGHV3OR16-12A0A075B7B8 117 aa13.46□□□□□ -0.25
CDKN3-209ENST00000556102 DUXBA0A1W2PPF3 345 aa13.46□□□□□ -0.25
CDKN3-209ENST00000556102 SNRPGP15A8MWD9 76 aa13.46□□□□□ -0.25
CDKN3-209ENST00000556102 SPATA31B1PQ5VZV4 182 aa13.46□□□□□ -0.25
CDKN3-209ENST00000556102 ZNF709Q8N972 641 aa13.46□□□□□ -0.25
CDKN3-209ENST00000556102 TRGV9Q99603 122 aa13.46□□□□□ -0.25
CDKN3-209ENST00000556102 SOSTQ9BQB4 213 aa13.46□□□□□ -0.25
CDKN3-209ENST00000556102 RFNGQ9Y644 331 aa13.46□□□□□ -0.25
CDKN3-209ENST00000556102 PKHD1P08F94 4074 aa13.45□□□□□ -0.26
CDKN3-209ENST00000556102 TEX48A0A1B0GUV7 120 aa13.45□□□□□ -0.26
CDKN3-209ENST00000556102 ISLRO14498 428 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms