RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ISG15P05161 165 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 COX7CP15954 63 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 TCL1AP56279 114 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 FXYD4P59646 89 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 MLLT11Q13015 90 aaPredicted RBP-0.43□□□□□ -2.48
SNX6-204ENST00000555541 SPOPLQ6IQ16 392 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 LRRN1Q6UXK5 716 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 ZNF833PQ6ZTB9 187 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 SLC30A7Q8NEW0 376 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 OR5D14Q8NGL3 314 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 PIGXQ8TBF5 258 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 CANT1Q8WVQ1 401 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 SLAMF6Q96DU3 332 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 LYSMD1Q96S90 227 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 CHMP4BQ9H444 224 aaKnown RBP-0.43□□□□□ -2.48
SNX6-204ENST00000555541 FGFR1OP2Q9NVK5 253 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 IDI2-AS1Q9NZ38 188 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 OPTCQ9UBM4 332 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 OR52A1Q9UKL2 312 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 U3KQA8 63 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 PHRF1Q9P1Y6 1649 aaKnown RBP-0.43□□□□□ -2.48
SNX6-204ENST00000555541 ABCC11Q96J66 1382 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 M0QZ92 97 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 PSMD12O00232 456 aaPredicted RBP-0.44□□□□□ -2.48
SNX6-204ENST00000555541 TIMM17BO60830 172 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 OR2J2O76002 312 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 ERC2-IT1O76042 136 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 UBE2G2P60604 165 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 RPS20P60866 119 aaKnown RBP-0.44□□□□□ -2.48
SNX6-204ENST00000555541 SNRPD2P62316 118 aaKnown RBP-0.44□□□□□ -2.48
SNX6-204ENST00000555541 DYNLT1P63172 113 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 SFXN4Q6P4A7 337 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 Q8IYB0 196 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 C20orf196Q8IYI0 205 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 CNPY4Q8N129 248 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 KRT222Q8N1A0 295 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 RAB8BQ92930 207 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 CCL19Q99731 98 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 PRADC1Q9BSG0 188 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 DRC3Q9H069 523 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 LSM5Q9Y4Y9 91 aaKnown RBP-0.44□□□□□ -2.48
SNX6-204ENST00000555541 ABCA12Q86UK0 2595 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 CECR2Q9BXF3 1484 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 UNC79Q9P2D8 2635 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 RAD50Q92878 1312 aa-0.44□□□□□ -2.48
SNX6-204ENST00000555541 PIRO00625 290 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 TNNC2P02585 160 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 C8orf88P0DMB2 117 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 COX5BP10606 129 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 RPL5P46777 297 aaKnown RBP-0.45□□□□□ -2.48
SNX6-204ENST00000555541 RAB5BP61020 215 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 ALKAL1Q6UXT8 129 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 WFDC5Q8TCV5 224 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 CCDC90BQ9GZT6 254 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 FBXO5Q9UKT4 447 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 CYSLTR1Q9Y271 337 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 PKIGQ9Y2B9 76 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 LY96Q9Y6Y9 160 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 LOC285556D6RIA3 1793 aa-0.45□□□□□ -2.48
SNX6-204ENST00000555541 TTC28Q96AY4 2481 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 ABCA4P78363 2273 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 ODAMA1E959 279 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 IQCF5A8MTL0 148 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 H0Y980 276 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 LY6G6CO95867 125 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 SERPINE1P05121 402 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 OR5G3P0C626 314 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 CXCL8P10145 99 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 HADHBP55084 474 aaKnown RBP-0.46□□□□□ -2.48
SNX6-204ENST00000555541 PSME3P61289 254 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 OCIAD2Q56VL3 154 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 OGFRL1Q5TC84 451 aaPredicted RBP-0.46□□□□□ -2.48
SNX6-204ENST00000555541 Q8TAT8 98 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 SLC35B4Q969S0 331 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 ADAT3Q96EY9 351 aaPredicted RBP-0.46□□□□□ -2.48
SNX6-204ENST00000555541 PPP1R2P1Q96PQ5 205 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 LINC00467Q9BRT7 94 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 GGACTQ9BVM4 153 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 TCEAL2Q9H3H9 227 aaPredicted RBP-0.46□□□□□ -2.48
SNX6-204ENST00000555541 PROK2Q9HC23 129 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 BOKQ9UMX3 212 aaPredicted RBP-0.46□□□□□ -2.48
SNX6-204ENST00000555541 TAF1LQ8IZX4 1826 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 KIAA1549Q9HCM3 1950 aa-0.46□□□□□ -2.48
SNX6-204ENST00000555541 TET1Q8NFU7 2136 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 MED1Q15648 1581 aaPredicted RBP-0.47□□□□□ -2.48
SNX6-204ENST00000555541 C10orf142B7Z368 130 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 E7EUB6 86 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 LRRN3E7EW58 273 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 CYB5BO43169 146 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 CALUO43852 315 aaPredicted RBP-0.47□□□□□ -2.48
SNX6-204ENST00000555541 RBP1P09455 135 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 OCM2P0CE71 109 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 SMIM10L2AP0DMW4 78 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 SMIM10L2BP0DMW5 78 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 CD79AP11912 226 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 PSMB6P28072 239 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 DSCR4P56555 118 aaPredicted RBP-0.47□□□□□ -2.48
SNX6-204ENST00000555541 SKP1P63208 163 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 EIF5AP63241 154 aaKnown RBP-0.47□□□□□ -2.48
SNX6-204ENST00000555541 MED21Q13503 144 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms