RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MGST2Q99735 147 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 HSPB9Q9BQS6 159 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 CBLN4Q9NTU7 201 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 MRPS16Q9Y3D3 137 aaKnown RBP4.79□□□□□ -1.64
VPS33B-203ENST00000554264 ATRQ13535 2644 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 KIAA2026Q5HYC2 2103 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 HRNRQ86YZ3 2850 aaPredicted RBP4.78□□□□□ -1.64
VPS33B-203ENST00000554264 IZUMO1RA6ND01 250 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 HELTA6NFD8 242 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 DEFB108AA8MXU0 73 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 SNURFLB1AK76 121 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF324O75467 553 aaPredicted RBP4.78□□□□□ -1.64
VPS33B-203ENST00000554264 SERF1AO75920 110 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 IGHV3-9P01782 118 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 CCL2P13500 99 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 PMCHP20382 165 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 PRRX1P54821 245 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 EDDM3BP56851 147 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 SUMO2P61956 95 aaKnown RBP4.78□□□□□ -1.64
VPS33B-203ENST00000554264 RPL30P62888 115 aaKnown RBP4.78□□□□□ -1.64
VPS33B-203ENST00000554264 SRYQ05066 204 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 KRTAP1-1Q07627 177 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 SUMO4Q6EEV6 95 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 Q6ZT83 130 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 WDR86Q86TI4 376 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 LRP11Q86VZ4 500 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 BATF2Q8N1L9 274 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 C9orf106Q8NAJ2 232 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 OR1L4Q8NGR5 311 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 SLC25A40Q8TBP6 338 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 NEUROG1Q92886 237 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 DAZAP1Q96EP5 407 aaKnown RBP4.78□□□□□ -1.64
VPS33B-203ENST00000554264 COQ2Q96H96 371 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 OR2V2Q96R30 315 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 TMEM208Q9BTX3 173 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 SAP30LQ9HAJ7 183 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 PLEKHA3Q9HB20 300 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 SLC35D1Q9NTN3 355 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 TMEM14BQ9NUH8 114 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 C1RLQ9NZP8 487 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 GNG12Q9UBI6 72 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 NAT8BQ9UHF3 227 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 PSG11Q9UQ72 335 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 TCF19Q9Y242 345 aa4.78□□□□□ -1.64
VPS33B-203ENST00000554264 TRAV38-1A0A0B4J264 116 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 SMIM27A0A1W2PRY6 76 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 C15orf65H3BRN8 121 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 CD5LO43866 347 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 FCGR3BO75015 233 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 IGKV3-15P01624 115 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 LINC00869P0C866 280 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 IER3P46695 156 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 AMTP48728 403 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 PPOXP50336 477 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
VPS33B-203ENST00000554264 ATP5J2P56134 94 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 SELENOVP59797 346 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 BPIFB3P59826 476 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 UBE2G2P60604 165 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 KLF5Q13887 457 aaPredicted RBP4.77□□□□□ -1.65
VPS33B-203ENST00000554264 MORN2Q502X0 79 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 C2orf83Q53S99 150 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 IBA57Q5T440 356 aaKnown RBP4.77□□□□□ -1.65
VPS33B-203ENST00000554264 C9orf135Q5VTT2 229 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 FAM71F2Q6NXP2 309 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 WDR82Q6UXN9 313 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 TMEM256Q8N2U0 113 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 ARL6IP6Q8N6S5 226 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 OR52L2PQ8NGH6 319 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 OR1L8Q8NGR8 309 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 OR4A5Q8NH83 315 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 KLF14Q8TD94 323 aaPredicted RBP4.77□□□□□ -1.65
VPS33B-203ENST00000554264 IGFBPL1Q8WX77 278 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 STARD4Q96DR4 205 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF714Q96N38 554 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 FAM234AQ9H0X4 552 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 GAL3ST2Q9H3Q3 398 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 LPAR2Q9HBW0 351 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF331Q9NQX6 463 aaPredicted RBP4.77□□□□□ -1.65
VPS33B-203ENST00000554264 YAE1D1Q9NRH1 226 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 BET1LQ9NYM9 111 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 V9GYV3 84 aa4.77□□□□□ -1.65
VPS33B-203ENST00000554264 TLN2Q9Y4G6 2542 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 TRBV20OR9-2A0A075B6H5 130 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 A0A1W2PN81 502 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 FAM231BA6NCW3 169 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 DPRXA6NFQ7 191 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 SRRM5B3KS81 715 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 C16orf97H3BN30 126 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 M0R1X1 148 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 TIMM8AO60220 97 aaPredicted RBP4.76□□□□□ -1.65
VPS33B-203ENST00000554264 OR2J3O76001 311 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 CRYAAP02489 173 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 APCSP02743 223 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 OR5AL1P0C617 328 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 OR9G9P0C7N8 305 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 C8orf88P0DMB2 117 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 HIST1H1EP10412 219 aaKnown RBP4.76□□□□□ -1.65
VPS33B-203ENST00000554264 CBLN1P23435 193 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms