RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CTSGP08311 255 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 LINC00869P0C866 280 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 ARL3P36405 182 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 ZNF90Q03938 601 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 FOXL1Q12952 345 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 KHDC1LQ5JSQ8 128 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 FAM74A1Q5RGS3 127 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 ZNF600Q6ZNG1 722 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 ZNF491Q8N8L2 437 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 RNF152Q8N8N0 203 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 FAM213BQ8TBF2 198 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 WFDC12Q8WWY7 111 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 SAT2Q96F10 170 aaPredicted RBP8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 PFDN5Q99471 154 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 PEF1Q9UBV8 284 aaKnown RBP8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 PFDN2Q9UHV9 154 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 RNF24Q9Y225 148 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 ANKRD34BA5PLL1 514 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 GGCTO75223 188 aaKnown RBP8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 HYPMO75409 117 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 IGKV1-17P01599 117 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 OR5G3P0C626 314 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 PSG1P11464 419 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 ORM2P19652 201 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 GATA2P23769 480 aaPredicted RBP8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 CDX1P47902 265 aaPredicted RBP8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 RHOBP62745 196 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 C10orf99Q6UWK7 81 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 LCNL1Q6ZST4 164 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 OR1B1Q8NGR6 318 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 GATAD1Q8WUU5 269 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 CCDC140Q96MF4 163 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 PBDC1Q9BVG4 233 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 DNAJC4Q9NNZ3 241 aa8.11□□□□□ -1.11
TMEM55B-205ENST00000554028 ZNF469Q96JG9 3925 aaPredicted RBP8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 NUDT19A8MXV4 375 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 F8W735 103 aaPredicted RBP8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 BMPR1BO00238 502 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 HBE1P02100 147 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 LGALS1P09382 135 aaKnown RBP8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 H2AFB1P0C5Y9 115 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 LYZP61626 148 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 FAM106AQ4KMX7 169 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 C10orf113Q5VZT2 155 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 FAM122CQ6P4D5 195 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 DPF1Q92782 380 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 OR5B12Q96R08 314 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 CHRDL1Q9BU40 450 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 RPRMQ9NS64 109 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 RFNGQ9Y644 331 aa8.1□□□□□ -1.11
TMEM55B-205ENST00000554028 SVEP1Q4LDE5 3571 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 F8P00451 2351 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 OR2C1O95371 312 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 HSPB1P04792 205 aaKnown RBP8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 IL4P05112 153 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 CDC34P49427 236 aaPredicted RBP8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 TAS2R45P59539 299 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 PLP1P60201 277 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 SRSF2Q01130 221 aaKnown RBP8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 RPEL1Q2QD12 228 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 CLLU1Q5K131 121 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 FAM78BQ5VT40 261 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 MYOZ3Q8TDC0 251 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 RNF125Q96EQ8 232 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 NARS2Q96I59 477 aaKnown RBP8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 MRPL32Q9BYC8 188 aaKnown RBP8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 DOK5Q9P104 306 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 HIGD1AQ9Y241 93 aa8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 TSSC4Q9Y5U2 329 aaPredicted RBP8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 PUS1Q9Y606 427 aaKnown RBP eCLIP8.09□□□□□ -1.11
TMEM55B-205ENST00000554028 ZFHX3Q15911 3703 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 MTORP42345 2549 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 CTXND1A0A1B0GTU2 59 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 WI2-2373I1.2A0A1W2PRP0 233 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 PPP5D1E7EU14 171 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 NDUFA4O00483 81 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 ZP3P21754 424 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 ADMP35318 185 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 PROK1P58294 105 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 KIAA0141Q14154 515 aaPredicted RBP8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 RPP25LQ8N5L8 163 aaKnown RBP8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 KLHL30-AS1Q8NEE0 82 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 SFT2D1Q8WV19 159 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 C4orf3Q8WVX3 66 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 VSIRQ9H7M9 311 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 RABAC1Q9UI14 185 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 FUT9Q9Y231 359 aa8.08□□□□□ -1.12
TMEM55B-205ENST00000554028 IGHV3-35A0A0C4DH35 117 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 ZNF320A2RRD8 509 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 SEC14L6B5MCN3 397 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 CD28P10747 220 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 NPPCP23582 126 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 FHITP49789 147 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 GCSAMLQ5JQS6 135 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 LCN15Q6UWW0 184 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 TOMM20LQ6UXN7 152 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 LINC00305Q7Z4B0 112 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 C11orf44Q8N8P7 122 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 STXBP6Q8NFX7 210 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms