RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 ADMP35318 185 aa10.66□□□□□ -0.7
APEX1-205ENST00000553555 KIAA0141Q14154 515 aaPredicted RBP10.66□□□□□ -0.7
APEX1-205ENST00000553555 CLEC19AQ6UXS0 136 aa10.66□□□□□ -0.7
APEX1-205ENST00000553555 SSX7Q7RTT5 188 aa10.66□□□□□ -0.7
APEX1-205ENST00000553555 MARC2Q969Z3 335 aa10.66□□□□□ -0.7
APEX1-205ENST00000553555 CHRDL1Q9BU40 450 aa10.66□□□□□ -0.7
APEX1-205ENST00000553555 C19orf24Q9BVV8 132 aa10.66□□□□□ -0.7
APEX1-205ENST00000553555 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
APEX1-205ENST00000553555 CTXND1A0A1B0GTU2 59 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 A0A1B0GV50 99 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 SCGB2A1O75556 95 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 GPR183P32249 361 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 PLP1P60201 277 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 SPSB3Q6PJ21 355 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 PATE2Q6UY27 113 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 RNF152Q8N8N0 203 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 SFT2D1Q8WV19 159 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 TMEM37Q8WXS4 190 aa10.65□□□□□ -0.7
APEX1-205ENST00000553555 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 A0A1W2PPV4 95 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 NUPL2O15504 423 aaKnown RBP10.64□□□□□ -0.71
APEX1-205ENST00000553555 TGOLN2O43493 480 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 IGHV3-11P01762 117 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
APEX1-205ENST00000553555 CDC34P49427 236 aaPredicted RBP10.64□□□□□ -0.71
APEX1-205ENST00000553555 RHOBP62745 196 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 TOR2AQ5JU69 321 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 ZNF343Q6P1L6 599 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 COMMD1Q8N668 190 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 KLHDC1Q8N7A1 406 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 ZNF491Q8N8L2 437 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 OR51G1Q8NGK1 321 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 OR1L4Q8NGR5 311 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 Q8WTZ3 238 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 GATAD1Q8WUU5 269 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 RAB24Q969Q5 203 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 SLC25A22Q9H936 323 aa10.64□□□□□ -0.71
APEX1-205ENST00000553555 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
APEX1-205ENST00000553555 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.63□□□□□ -0.71
APEX1-205ENST00000553555 WI2-2373I1.2A0A1W2PRP0 233 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 EIF3GO75821 320 aaKnown RBP eCLIP10.63□□□□□ -0.71
APEX1-205ENST00000553555 NDUFA7O95182 113 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 OR5G3P0C626 314 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 FAM78BQ5VT40 261 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 SPATA31B1PQ5VZV4 182 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 LCN15Q6UWW0 184 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 OR4X2Q8NGF9 303 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 MYOZ3Q8TDC0 251 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 PFDN5Q99471 154 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 RNF2Q99496 336 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 DOK5Q9P104 306 aa10.63□□□□□ -0.71
APEX1-205ENST00000553555 ELOA3CA0A087WX78 387 aaPredicted RBP10.62□□□□□ -0.71
APEX1-205ENST00000553555 MAP1LC3B2A6NCE7 125 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 COX7A2P2O60397 106 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 HYPMO75409 117 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 OR2C1O95371 312 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 HBE1P02100 147 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 ORM2P19652 201 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 CCL20P78556 96 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 C10orf113Q5VZT2 155 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 ZNF600Q6ZNG1 722 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 OR5AU1Q8NGC0 362 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 OR1B1Q8NGR6 318 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 LINC01006Q8NI28 216 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 NARS2Q96I59 477 aaKnown RBP10.62□□□□□ -0.71
APEX1-205ENST00000553555 MAP1LC3BQ9GZQ8 125 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 FUT9Q9Y231 359 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 PPP5D1E7EU14 171 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 HMGB3O15347 200 aaKnown RBP10.62□□□□□ -0.71
APEX1-205ENST00000553555 FGF8P55075 233 aaPredicted RBP10.62□□□□□ -0.71
APEX1-205ENST00000553555 LYZP61626 148 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 MIR17HGQ75NE6 70 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
APEX1-205ENST00000553555 LINC00052Q96N35 136 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 TMEM231Q9H6L2 316 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 GNB4Q9HAV0 340 aa10.62□□□□□ -0.71
APEX1-205ENST00000553555 MRPL27Q9P0M9 148 aaKnown RBP10.62□□□□□ -0.71
APEX1-205ENST00000553555 SETD2Q9BYW2 2564 aaPredicted RBP10.61□□□□□ -0.71
APEX1-205ENST00000553555 C2CD3Q4AC94 2353 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 NUDT19A8MXV4 375 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 TRBV12-3P01733 135 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 IL4P05112 153 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 STAG3L2P0CL84 134 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 STAG3L3P0CL85 134 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 ARL3P36405 182 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
APEX1-205ENST00000553555 FAM209BQ5JX69 171 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 IL34Q6ZMJ4 242 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 RNF125Q96EQ8 232 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 MRPL32Q9BYC8 188 aaKnown RBP10.61□□□□□ -0.71
APEX1-205ENST00000553555 TREM1Q9NP99 234 aa10.61□□□□□ -0.71
APEX1-205ENST00000553555 PUS1Q9Y606 427 aaKnown RBP eCLIP10.61□□□□□ -0.71
APEX1-205ENST00000553555 TEP1Q99973 2627 aaKnown RBP10.61□□□□□ -0.71
APEX1-205ENST00000553555 IGHV3-35A0A0C4DH35 117 aa10.6□□□□□ -0.71
APEX1-205ENST00000553555 TOMM20LQ6UXN7 152 aa10.6□□□□□ -0.71
APEX1-205ENST00000553555 LINC00305Q7Z4B0 112 aa10.6□□□□□ -0.71
APEX1-205ENST00000553555 EIF4E3Q8N5X7 224 aaKnown RBP10.6□□□□□ -0.71
APEX1-205ENST00000553555 UHRF2Q96PU4 802 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms