RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TMEM182Q6ZP80 229 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-206ENST00000553529 TRPT1Q86TN4 253 aaKnown RBP13.3□□□□□ -0.28
SHMT2-206ENST00000553529 A0A1W2PS18 150 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 C9orf170A2RU37 121 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 PRSS46E5RG02 174 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 BUB3O43684 328 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 GATA2P23769 480 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-206ENST00000553529 NANOS2P60321 138 aaKnown RBP13.29□□□□□ -0.28
SHMT2-206ENST00000553529 PSMG4Q5JS54 123 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 ACTL10Q5JWF8 245 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 TRIQKQ629K1 86 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 OR11H2Q8NH07 326 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 RNF125Q96EQ8 232 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 RARRES2Q99969 163 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 SLC25A21Q9BQT8 299 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-206ENST00000553529 TMEM231Q9H6L2 316 aa13.29□□□□□ -0.28
SHMT2-206ENST00000553529 ZFP92A6NM28 416 aa13.28□□□□□ -0.28
SHMT2-206ENST00000553529 NDUFB6O95139 128 aa13.28□□□□□ -0.28
SHMT2-206ENST00000553529 LYZP61626 148 aa13.28□□□□□ -0.28
SHMT2-206ENST00000553529 ETFRF1Q6IPR1 90 aa13.28□□□□□ -0.28
SHMT2-206ENST00000553529 WDR12Q9GZL7 423 aaKnown RBP13.28□□□□□ -0.28
SHMT2-206ENST00000553529 NDUFA13Q9P0J0 144 aa13.28□□□□□ -0.28
SHMT2-206ENST00000553529 TRAV2A0A0B4J234 112 aa13.27□□□□□ -0.29
SHMT2-206ENST00000553529 IL7P13232 177 aa13.27□□□□□ -0.29
SHMT2-206ENST00000553529 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.29
SHMT2-206ENST00000553529 GDF5OSQ5U4N7 250 aa13.27□□□□□ -0.29
SHMT2-206ENST00000553529 STHQ8IWL8 128 aa13.27□□□□□ -0.29
SHMT2-206ENST00000553529 DUXBA0A1W2PPF3 345 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 FAM90A26D6RGX4 464 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 PLA2G10O15496 165 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 SYNGR2O43760 224 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-206ENST00000553529 INPP1P49441 399 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 SPANXN5Q5MJ07 72 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 SLC35E1Q96K37 410 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 TMED3Q9Y3Q3 217 aa13.26□□□□□ -0.29
SHMT2-206ENST00000553529 SCGB2A1O75556 95 aa13.25□□□□□ -0.29
SHMT2-206ENST00000553529 OR4E1P0C645 316 aa13.25□□□□□ -0.29
SHMT2-206ENST00000553529 GRAMD2BQ96HH9 432 aa13.25□□□□□ -0.29
SHMT2-206ENST00000553529 C17orf77Q96MU5 243 aa13.25□□□□□ -0.29
SHMT2-206ENST00000553529 RAB40CQ96S21 281 aa13.25□□□□□ -0.29
SHMT2-206ENST00000553529 HELTA6NFD8 242 aa13.24□□□□□ -0.29
SHMT2-206ENST00000553529 CD5P06127 495 aa13.24□□□□□ -0.29
SHMT2-206ENST00000553529 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
SHMT2-206ENST00000553529 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
SHMT2-206ENST00000553529 GPX4P36969 197 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-206ENST00000553529 EIF2B2P49770 351 aaKnown RBP13.24□□□□□ -0.29
SHMT2-206ENST00000553529 CMC4P56277 68 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-206ENST00000553529 FXYD7P58549 80 aa13.24□□□□□ -0.29
SHMT2-206ENST00000553529 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
SHMT2-206ENST00000553529 NARS2Q96I59 477 aaKnown RBP13.24□□□□□ -0.29
SHMT2-206ENST00000553529 CCSO14618 274 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 SSSCA1O60232 199 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 IGKV3-20P01619 116 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 SLC25A6P12236 298 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 PAX9P55771 341 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 CEMP1Q6PRD7 247 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-206ENST00000553529 ACOT7LQ6ZUV0 252 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 NOXA1Q86UR1 476 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 Q8NAQ8 132 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 OR4D5Q8NGN0 318 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 LINC00476Q8WZB0 136 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 FBXL17Q9UF56 701 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 X6R8D5 127 aa13.23□□□□□ -0.29
SHMT2-206ENST00000553529 IGHV4-28A0A0C4DH34 117 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 PMS2P5A8MQ11 134 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 F6UB75 175 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 JTBO76095 146 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 LY6G6CO95867 125 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 SCGB1D2O95969 90 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 THAP8Q8NA92 274 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 GATAD1Q8WUU5 269 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 PHLDA1Q8WV24 401 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-206ENST00000553529 C20orf173Q96LM9 149 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 NRN1Q9NPD7 142 aa13.22□□□□□ -0.29
SHMT2-206ENST00000553529 NAP1L6A6NFF2 107 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 SOCS3O14543 225 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 RAB11AP62491 216 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 ID3Q02535 119 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 C4orf46Q504U0 113 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 IGFL4Q6B9Z1 124 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 OR8G2PQ6IF36 304 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 ZNF767PQ75MW2 155 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 CSNK1G2-AS1Q8NCQ2 148 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 DEDD2Q8WXF8 326 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 TRGV9Q99603 122 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 SLC25A32Q9H2D1 315 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 DOK5Q9P104 306 aa13.21□□□□□ -0.29
SHMT2-206ENST00000553529 TRAV6A0A075B6T7 132 aa13.2□□□□□ -0.3
SHMT2-206ENST00000553529 ELOA3CA0A087WX78 387 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-206ENST00000553529 RRAS2P62070 204 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-206ENST00000553529 LINC00052Q96N35 136 aa13.2□□□□□ -0.3
SHMT2-206ENST00000553529 SEC22CQ9BRL7 303 aa13.2□□□□□ -0.3
SHMT2-206ENST00000553529 C20orf85Q9H1P6 137 aa13.2□□□□□ -0.3
SHMT2-206ENST00000553529 PSENENQ9NZ42 101 aa13.2□□□□□ -0.3
SHMT2-206ENST00000553529 XCL2Q9UBD3 114 aa13.2□□□□□ -0.3
SHMT2-206ENST00000553529 CACFD1Q9UGQ2 172 aa13.2□□□□□ -0.3
SHMT2-206ENST00000553529 CELA1Q9UNI1 258 aa13.2□□□□□ -0.3
SHMT2-206ENST00000553529 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms