RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 BMI1P35226 326 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 TFPI2P48307 235 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 ASAH1Q13510 395 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 CASC10Q5T4H9 136 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 KIR2DL5AQ8N109 375 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 KIR2DL5BQ8NHK3 375 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 S100ZQ8WXG8 99 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 WFDC3Q8IUB2 231 aa14.2□□□□□ -0.14
PTCH1-227ENST00000553256 TRGV9Q99603 122 aa14.2□□□□□ -0.14
PTCH1-227ENST00000553256 TMEM231Q9H6L2 316 aa14.2□□□□□ -0.14
PTCH1-227ENST00000553256 NUDT15Q9NV35 164 aa14.2□□□□□ -0.14
PTCH1-227ENST00000553256 RCL1Q9Y2P8 373 aaKnown RBP14.2□□□□□ -0.14
PTCH1-227ENST00000553256 NKX2-1P43699 371 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-227ENST00000553256 CMC4P56277 68 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-227ENST00000553256 RAB11AP62491 216 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 TMEM14EPQ6UXP3 125 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 Q6ZWC4 215 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 ZBTB8BQ8NAP8 495 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-227ENST00000553256 OR51G1Q8NGK1 321 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 RNF125Q96EQ8 232 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 SLC35E1Q96K37 410 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 SMIM8Q96KF7 97 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 C11orf1Q9H5F2 150 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 TP53TG1Q9Y2A0 90 aa14.19□□□□□ -0.14
PTCH1-227ENST00000553256 TRAV6A0A075B6T7 132 aa14.18□□□□□ -0.14
PTCH1-227ENST00000553256 H3BP45 60 aa14.18□□□□□ -0.14
PTCH1-227ENST00000553256 PAFAH1B2P68402 229 aa14.18□□□□□ -0.14
PTCH1-227ENST00000553256 IL15RAQ13261 267 aa14.18□□□□□ -0.14
PTCH1-227ENST00000553256 TMEM182Q6ZP80 229 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-227ENST00000553256 ZNF431Q8TF32 576 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-227ENST00000553256 GRAMD2BQ96HH9 432 aa14.18□□□□□ -0.14
PTCH1-227ENST00000553256 SEC22CQ9BRL7 303 aa14.18□□□□□ -0.14
PTCH1-227ENST00000553256 HYDINQ4G0P3 5121 aa14.17□□□□□ -0.14
PTCH1-227ENST00000553256 UBE2CO00762 179 aa14.17□□□□□ -0.14
PTCH1-227ENST00000553256 UPK1BO75841 260 aa14.17□□□□□ -0.14
PTCH1-227ENST00000553256 CCNKO75909 580 aa14.17□□□□□ -0.14
PTCH1-227ENST00000553256 IFNA21P01568 189 aa14.17□□□□□ -0.14
PTCH1-227ENST00000553256 IAH1Q2TAA2 248 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-227ENST00000553256 SPANXN5Q5MJ07 72 aa14.17□□□□□ -0.14
PTCH1-227ENST00000553256 OR8G2PQ6IF36 304 aa14.17□□□□□ -0.14
PTCH1-227ENST00000553256 TENM2Q9NT68 2774 aa14.17□□□□□ -0.14
PTCH1-227ENST00000553256 ZFP92A6NM28 416 aa14.16□□□□□ -0.14
PTCH1-227ENST00000553256 MBPP02686 304 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-227ENST00000553256 APOC4P55056 127 aa14.16□□□□□ -0.14
PTCH1-227ENST00000553256 DEFB131AP59861 70 aa14.16□□□□□ -0.14
PTCH1-227ENST00000553256 RPP30P78346 268 aaKnown RBP14.16□□□□□ -0.14
PTCH1-227ENST00000553256 ACOT7LQ6ZUV0 252 aa14.16□□□□□ -0.14
PTCH1-227ENST00000553256 RNF183Q96D59 192 aa14.16□□□□□ -0.14
PTCH1-227ENST00000553256 C17orf77Q96MU5 243 aa14.16□□□□□ -0.14
PTCH1-227ENST00000553256 RABAC1Q9UI14 185 aa14.16□□□□□ -0.14
PTCH1-227ENST00000553256 STRAPQ9Y3F4 350 aaKnown RBP14.16□□□□□ -0.14
PTCH1-227ENST00000553256 SSSCA1O60232 199 aa14.15□□□□□ -0.14
PTCH1-227ENST00000553256 GIG44P09565 113 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-227ENST00000553256 H2AFB2P0C5Z0 115 aa14.15□□□□□ -0.14
PTCH1-227ENST00000553256 RPL35AP18077 110 aaKnown RBP14.15□□□□□ -0.14
PTCH1-227ENST00000553256 EIF2B2P49770 351 aaKnown RBP14.15□□□□□ -0.14
PTCH1-227ENST00000553256 TAS2R30P59541 319 aa14.15□□□□□ -0.14
PTCH1-227ENST00000553256 WDR12Q9GZL7 423 aaKnown RBP14.15□□□□□ -0.14
PTCH1-227ENST00000553256 PSENENQ9NZ42 101 aa14.15□□□□□ -0.14
PTCH1-227ENST00000553256 C7orf66A4D0T2 115 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 HELTA6NFD8 242 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 DNASE2O00115 360 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-227ENST00000553256 CCSO14618 274 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 ARL16Q0P5N6 197 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 ZNF846Q147U1 533 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 LEMD1Q68G75 181 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 TMEM144Q7Z5S9 345 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 STXBP6Q8NFX7 210 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 RAB40CQ96S21 281 aa14.14□□□□□ -0.15
PTCH1-227ENST00000553256 SEPSECSQ9HD40 501 aaKnown RBP14.14□□□□□ -0.15
PTCH1-227ENST00000553256 FAM240BA0A1B0GVZ2 78 aa14.13□□□□□ -0.15
PTCH1-227ENST00000553256 TSC22D2O75157 780 aa14.13□□□□□ -0.15
PTCH1-227ENST00000553256 IL5P05113 134 aa14.13□□□□□ -0.15
PTCH1-227ENST00000553256 LYL1P12980 280 aa14.13□□□□□ -0.15
PTCH1-227ENST00000553256 RPL11P62913 178 aaKnown RBP14.13□□□□□ -0.15
PTCH1-227ENST00000553256 DEFB135Q30KP9 77 aa14.13□□□□□ -0.15
PTCH1-227ENST00000553256 TRPT1Q86TN4 253 aaKnown RBP14.13□□□□□ -0.15
PTCH1-227ENST00000553256 CSTL1Q9H114 145 aa14.13□□□□□ -0.15
PTCH1-227ENST00000553256 BATF3Q9NR55 127 aa14.13□□□□□ -0.15
PTCH1-227ENST00000553256 ALMS1Q8TCU4 4167 aa14.12□□□□□ -0.15
PTCH1-227ENST00000553256 SNRPGP15A8MWD9 76 aa14.12□□□□□ -0.15
PTCH1-227ENST00000553256 SOCS3O14543 225 aa14.12□□□□□ -0.15
PTCH1-227ENST00000553256 SPRY2O43597 315 aa14.12□□□□□ -0.15
PTCH1-227ENST00000553256 AP2S1P53680 142 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-227ENST00000553256 EWSR1Q01844 656 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTCH1-227ENST00000553256 OR2F1Q13607 317 aa14.12□□□□□ -0.15
PTCH1-227ENST00000553256 SIGLEC15Q6ZMC9 328 aa14.12□□□□□ -0.15
PTCH1-227ENST00000553256 C12orf45Q8N5I9 185 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-227ENST00000553256 NARS2Q96I59 477 aaKnown RBP14.12□□□□□ -0.15
PTCH1-227ENST00000553256 NRN1Q9NPD7 142 aa14.12□□□□□ -0.15
PTCH1-227ENST00000553256 PAIP2BQ9ULR5 123 aaKnown RBP14.12□□□□□ -0.15
PTCH1-227ENST00000553256 AGRNO00468 2067 aa14.11□□□□□ -0.15
PTCH1-227ENST00000553256 FNDC10F2Z333 226 aa14.11□□□□□ -0.15
PTCH1-227ENST00000553256 ZNF688P0C7X2 276 aa14.11□□□□□ -0.15
PTCH1-227ENST00000553256 GATA2P23769 480 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-227ENST00000553256 DLK1P80370 383 aa14.11□□□□□ -0.15
PTCH1-227ENST00000553256 C1orf194Q5T5A4 169 aa14.11□□□□□ -0.15
PTCH1-227ENST00000553256 MZT2BQ6NZ67 158 aa14.11□□□□□ -0.15
PTCH1-227ENST00000553256 GSKIPQ9P0R6 139 aa14.11□□□□□ -0.15
PTCH1-227ENST00000553256 SLC45A2Q9UMX9 530 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms