RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 BUB3O43684 328 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 NDUFB6O95139 128 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 ATF4P18848 351 aaPredicted RBP9.5□□□□□ -0.89
NPAS3-209ENST00000551008 RPL11P62913 178 aaKnown RBP9.5□□□□□ -0.89
NPAS3-209ENST00000551008 ZNF90Q03938 601 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 GGNBP1Q5YKI7 109 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 ETFRF1Q6IPR1 90 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 CENPSQ8N2Z9 138 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 OR51G1Q8NGK1 321 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 Q8WTZ3 238 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 VPS13DQ5THJ4 4388 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 C9orf170A2RU37 121 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 FAM90A26D6RGX4 464 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 ADAP1O75689 374 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
NPAS3-209ENST00000551008 HOXB5P09067 269 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 RD3LP0DJH9 198 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 SPANXN2Q5MJ10 180 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 GSG1LQ6UXU4 331 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 NOXA1Q86UR1 476 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 MAGT1Q9H0U3 335 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 TMED3Q9Y3Q3 217 aa9.49□□□□□ -0.89
NPAS3-209ENST00000551008 SCGB2A1O75556 95 aa9.48□□□□□ -0.89
NPAS3-209ENST00000551008 IFNA4P05014 189 aa9.48□□□□□ -0.89
NPAS3-209ENST00000551008 GPX4P36969 197 aaPredicted RBP9.48□□□□□ -0.89
NPAS3-209ENST00000551008 THAP8Q8NA92 274 aa9.48□□□□□ -0.89
NPAS3-209ENST00000551008 OR11H2Q8NH07 326 aa9.48□□□□□ -0.89
NPAS3-209ENST00000551008 RNF125Q96EQ8 232 aa9.48□□□□□ -0.89
NPAS3-209ENST00000551008 C11orf68Q9H3H3 251 aaKnown RBP9.48□□□□□ -0.89
NPAS3-209ENST00000551008 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
NPAS3-209ENST00000551008 CXorf65A6NEN9 183 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 SYNGR2O43760 224 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 IL7P13232 177 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 ATP5IP56385 69 aaPredicted RBP9.47□□□□□ -0.89
NPAS3-209ENST00000551008 DEFB1P60022 68 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 UBE2MP61081 183 aaKnown RBP9.47□□□□□ -0.89
NPAS3-209ENST00000551008 DHRS2Q13268 280 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
NPAS3-209ENST00000551008 Q8NAQ8 132 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 CSNK1G2-AS1Q8NCQ2 148 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 LINC00476Q8WZB0 136 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 C17orf77Q96MU5 243 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 RARRES2Q99969 163 aa9.47□□□□□ -0.89
NPAS3-209ENST00000551008 LINC00854A0A1B0GVQ3 168 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 HELTA6NFD8 242 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 H3BP45 60 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 WRBO00258 174 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 SOCS3O14543 225 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 DEFB4AO15263 64 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 PLA2G10O15496 165 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 JTBO76095 146 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 RBMY1A1P0DJD3 496 aaKnown RBP9.46□□□□□ -0.9
NPAS3-209ENST00000551008 RBMY1CP0DJD4 496 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 ANXA7P20073 488 aaKnown RBP9.46□□□□□ -0.9
NPAS3-209ENST00000551008 EIF2B2P49770 351 aaKnown RBP9.46□□□□□ -0.9
NPAS3-209ENST00000551008 ID3Q02535 119 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 OR2F1Q13607 317 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 RBMY1FQ15415 496 aaKnown RBP9.46□□□□□ -0.9
NPAS3-209ENST00000551008 PSMG4Q5JS54 123 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 ACTL10Q5JWF8 245 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 SIGLEC15Q6ZMC9 328 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 TMEM182Q6ZP80 229 aaPredicted RBP9.46□□□□□ -0.9
NPAS3-209ENST00000551008 STHQ8IWL8 128 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 OR4D5Q8NGN0 318 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 NARS2Q96I59 477 aaKnown RBP9.46□□□□□ -0.9
NPAS3-209ENST00000551008 SLC35E1Q96K37 410 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 RAB40CQ96S21 281 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 TRGV9Q99603 122 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 WDR12Q9GZL7 423 aaKnown RBP9.46□□□□□ -0.9
NPAS3-209ENST00000551008 NRN1Q9NPD7 142 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 DNAH6Q9C0G6 4158 aa9.46□□□□□ -0.9
NPAS3-209ENST00000551008 NUPR2A6NF83 97 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 NAP1L6A6NFF2 107 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 ZFP92A6NM28 416 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 PMS2P5A8MQ11 134 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 CCNKO75909 580 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 OR4E1P0C645 316 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 PAX9P55771 341 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 NANOS2P60321 138 aaKnown RBP9.45□□□□□ -0.9
NPAS3-209ENST00000551008 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 TRIQKQ629K1 86 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 OR8G2PQ6IF36 304 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 PBDC1Q9BVG4 233 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 X6R8D5 127 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 FRAS1Q86XX4 4008 aa9.45□□□□□ -0.9
NPAS3-209ENST00000551008 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
NPAS3-209ENST00000551008 PIGBOS1A0A0B4J2F0 54 aa9.44□□□□□ -0.9
NPAS3-209ENST00000551008 ZNF705EA8MWA4 302 aaPredicted RBP9.44□□□□□ -0.9
NPAS3-209ENST00000551008 MED6O75586 246 aa9.44□□□□□ -0.9
NPAS3-209ENST00000551008 GATA2P23769 480 aaPredicted RBP9.44□□□□□ -0.9
NPAS3-209ENST00000551008 LYZP61626 148 aa9.44□□□□□ -0.9
NPAS3-209ENST00000551008 POLR2GP62487 172 aaKnown RBP eCLIP9.44□□□□□ -0.9
NPAS3-209ENST00000551008 PHLDA1Q8WV24 401 aaPredicted RBP9.44□□□□□ -0.9
NPAS3-209ENST00000551008 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
NPAS3-209ENST00000551008 CLEC5AQ9NY25 188 aa9.44□□□□□ -0.9
NPAS3-209ENST00000551008 IGHV4-28A0A0C4DH34 117 aa9.43□□□□□ -0.9
NPAS3-209ENST00000551008 H3BMM0 161 aa9.43□□□□□ -0.9
NPAS3-209ENST00000551008 SPP1P10451 314 aa9.43□□□□□ -0.9
NPAS3-209ENST00000551008 AP2S1P53680 142 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms