RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 BLNKQ8WV28 456 aa12.27□□□□□ -0.45
SCN8A-206ENST00000550891 SSX3Q99909 188 aa12.27□□□□□ -0.45
SCN8A-206ENST00000550891 S4R3C0 116 aa12.27□□□□□ -0.45
SCN8A-206ENST00000550891 CXCL1P09341 107 aa12.26□□□□□ -0.45
SCN8A-206ENST00000550891 GGTLC3B5MD39 225 aa12.26□□□□□ -0.45
SCN8A-206ENST00000550891 SLC25A16P16260 332 aa12.26□□□□□ -0.45
SCN8A-206ENST00000550891 C21orf62Q9NYP8 219 aa12.26□□□□□ -0.45
SCN8A-206ENST00000550891 SNRPCP09234 159 aaKnown RBP12.26□□□□□ -0.45
SCN8A-206ENST00000550891 AKR1D1P51857 326 aa12.26□□□□□ -0.45
SCN8A-206ENST00000550891 PLP1P60201 277 aa12.26□□□□□ -0.45
SCN8A-206ENST00000550891 YPEL4Q96NS1 127 aa12.26□□□□□ -0.45
SCN8A-206ENST00000550891 IGLV11-55A0A075B6I3 123 aa12.25□□□□□ -0.45
SCN8A-206ENST00000550891 TGOLN2O43493 480 aa12.25□□□□□ -0.45
SCN8A-206ENST00000550891 OR2J3O76001 311 aa12.25□□□□□ -0.45
SCN8A-206ENST00000550891 CD99P14209 185 aa12.25□□□□□ -0.45
SCN8A-206ENST00000550891 RANP62826 216 aaKnown RBP12.25□□□□□ -0.45
SCN8A-206ENST00000550891 SFRP2Q96HF1 295 aa12.25□□□□□ -0.45
SCN8A-206ENST00000550891 HIF1ANQ9NWT6 349 aa12.25□□□□□ -0.45
SCN8A-206ENST00000550891 A0A1W2PPQ1 181 aa12.25□□□□□ -0.45
SCN8A-206ENST00000550891 OCC1Q8TAD7 63 aa12.25□□□□□ -0.45
SCN8A-206ENST00000550891 C9JCJ5 164 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 IGKV1-17P01599 117 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 HIST1H1BP16401 226 aaKnown RBP12.24□□□□□ -0.45
SCN8A-206ENST00000550891 CNN1P51911 297 aaKnown RBP12.24□□□□□ -0.45
SCN8A-206ENST00000550891 PPP5D1E7EU14 171 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 IL4P05112 153 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 NBEAP1P0C6P0 100 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 CENPWQ5EE01 88 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 ASPHD1Q5U4P2 390 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 SGMS2Q8NHU3 365 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 AJUBAQ96IF1 538 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 FBXL7Q9UJT9 491 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 TRBV20OR9-2A0A075B6H5 130 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 A0A0U1RQK1 487 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 LEMD1Q68G75 181 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 TMEM219Q86XT9 240 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 OR10G8Q8NGN5 311 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 FXYD5Q96DB9 178 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 MOB4Q9Y3A3 225 aa12.24□□□□□ -0.45
SCN8A-206ENST00000550891 TRBV24-1A0A075B6N3 115 aa12.23□□□□□ -0.45
SCN8A-206ENST00000550891 SRP14P37108 136 aaKnown RBP12.23□□□□□ -0.45
SCN8A-206ENST00000550891 C1QL4Q86Z23 238 aa12.23□□□□□ -0.45
SCN8A-206ENST00000550891 HSPB9Q9BQS6 159 aa12.23□□□□□ -0.45
SCN8A-206ENST00000550891 SLC25A39Q9BZJ4 359 aaPredicted RBP12.23□□□□□ -0.45
SCN8A-206ENST00000550891 ATP6V0E1O15342 81 aa12.23□□□□□ -0.45
SCN8A-206ENST00000550891 TOMM40O96008 361 aa12.23□□□□□ -0.45
SCN8A-206ENST00000550891 RNF125Q96EQ8 232 aa12.23□□□□□ -0.45
SCN8A-206ENST00000550891 BTF3L4Q96K17 158 aa12.23□□□□□ -0.45
SCN8A-206ENST00000550891 ELOVL1Q9BW60 279 aa12.23□□□□□ -0.45
SCN8A-206ENST00000550891 SLC25A5P05141 298 aaKnown RBP12.22□□□□□ -0.45
SCN8A-206ENST00000550891 ERVFC1-1P60608 527 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 LY96Q9Y6Y9 160 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 TRAV20A0A0B4J274 112 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 GATA3P23771 443 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 RPH3ALQ9UNE2 315 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 ASH1LQ9NR48 2969 aaKnown RBP12.22□□□□□ -0.45
SCN8A-206ENST00000550891 IGHV3-23P01764 117 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 IGHV4-38-2P0DP08 117 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 MGST1P10620 155 aaKnown RBP12.22□□□□□ -0.45
SCN8A-206ENST00000550891 SNRPEP62304 92 aaKnown RBP12.22□□□□□ -0.45
SCN8A-206ENST00000550891 FAM110DQ8TAY7 271 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-206ENST00000550891 TMEM68Q96MH6 324 aa12.22□□□□□ -0.45
SCN8A-206ENST00000550891 PGPA6NDG6 321 aa12.21□□□□□ -0.45
SCN8A-206ENST00000550891 NDUFB8O95169 186 aa12.21□□□□□ -0.45
SCN8A-206ENST00000550891 YPEL3P61236 119 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-206ENST00000550891 UBE2G1P62253 170 aa12.21□□□□□ -0.45
SCN8A-206ENST00000550891 SRSF1Q07955 248 aaKnown RBP eCLIP12.21□□□□□ -0.45
SCN8A-206ENST00000550891 OR4F17Q8NGA8 305 aa12.21□□□□□ -0.45
SCN8A-206ENST00000550891 TCEAL7Q9BRU2 100 aa12.21□□□□□ -0.45
SCN8A-206ENST00000550891 PFN1P07737 140 aaKnown RBP12.21□□□□□ -0.45
SCN8A-206ENST00000550891 TEX38Q6PEX7 206 aa12.21□□□□□ -0.45
SCN8A-206ENST00000550891 BPIFA4PQ86YQ2 179 aa12.21□□□□□ -0.45
SCN8A-206ENST00000550891 SH2D7A6NKC9 451 aaPredicted RBP12.21□□□□□ -0.46
SCN8A-206ENST00000550891 PEX7O00628 323 aa12.21□□□□□ -0.46
SCN8A-206ENST00000550891 TRGC2P03986 189 aa12.21□□□□□ -0.46
SCN8A-206ENST00000550891 ZNF600Q6ZNG1 722 aa12.21□□□□□ -0.46
SCN8A-206ENST00000550891 RNF24Q9Y225 148 aa12.21□□□□□ -0.46
SCN8A-206ENST00000550891 OR2T8A6NH00 312 aa12.2□□□□□ -0.46
SCN8A-206ENST00000550891 ZNF329Q86UD4 541 aa12.2□□□□□ -0.46
SCN8A-206ENST00000550891 C5orf56Q8N8D9 126 aa12.2□□□□□ -0.46
SCN8A-206ENST00000550891 CMTM2Q8TAZ6 248 aa12.2□□□□□ -0.46
SCN8A-206ENST00000550891 EGR2P11161 476 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-206ENST00000550891 PAX1P15863 534 aa12.2□□□□□ -0.46
SCN8A-206ENST00000550891 S100A7P31151 101 aa12.2□□□□□ -0.46
SCN8A-206ENST00000550891 FCGR2BP31994 310 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-206ENST00000550891 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
SCN8A-206ENST00000550891 ZNF48Q96MX3 618 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-206ENST00000550891 TAS2R60P59551 318 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 RHOGP84095 191 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 LY6EQ16553 131 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 C15orf32Q32M92 178 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 ZNF491Q8N8L2 437 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 MEGF9Q9H1U4 602 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 H3BTX0 84 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 HIST1H1EP10412 219 aaKnown RBP12.19□□□□□ -0.46
SCN8A-206ENST00000550891 GP9P14770 177 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 FAM3BP58499 235 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-206ENST00000550891 MRPL27Q9P0M9 148 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms