RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 TRAV41A0A0B4J266 112 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 ARRDC5A6NEK1 342 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 INMT-MINDY4F8WBC2 141 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 H3BT86 120 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 I3L521 148 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 CORTO00230 105 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 PLA2G10O15496 165 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 NPYP01303 97 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 HLA-DRB1P01911 266 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 IGKV1-16P04430 117 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 RPS3P23396 243 aaKnown RBP eCLIP1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 CD24P25063 80 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 POLR2HP52434 150 aaKnown RBP1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 FKBP1AP62942 108 aaKnown RBP1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 DEFB103AP81534 67 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 LTC4SQ16873 150 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 OCIAD2Q56VL3 154 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 ZNF705AQ6ZN79 300 aaPredicted RBP1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 SLC22A24Q8N4F4 322 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 MBD3L1Q8WWY6 194 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 TMEM106AQ96A25 262 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 IMMP2LQ96T52 175 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 POPDC3Q9HBV1 291 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 GNG8Q9UK08 70 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 ZFP30Q9Y2G7 519 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 RBM7Q9Y580 266 aaKnown RBP1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 IBTKQ9P2D0 1353 aaPredicted RBP1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 MIA2Q96PC5 1412 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 VWDEQ8N2E2 1590 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 ADGBQ8N7X0 1667 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 COL4A2P08572 1712 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 PLXNA3P51805 1871 aa1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 DICER1Q9UPY3 1922 aaKnown RBP1.54□□□□□ -2.16
TSPAN8-205ENST00000550818 TRAV38-1A0A0B4J264 116 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 TRAV4A0A0B4J268 109 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 IGHV1-69-2A0A0G2JMI3 117 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 OVOS2A0A0G2JMS6 1433 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 DUXBA0A1W2PPF3 345 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 C20orf202A1L168 122 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 RIIAD1A6NNX1 92 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 A8MUN3 132 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 F6UZH7 168 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 LST1O00453 97 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 SBF1O95248 1867 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 NCR2O95944 276 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 CSN2P05814 226 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 UCHL1P09936 223 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 SMIM17P0DL12 118 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 DEFA4P12838 97 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 RPL7P18124 248 aaKnown RBP1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 PPIBP23284 216 aaKnown RBP1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 S100A7P31151 101 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 EMP1P54849 157 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 NCS1P62166 190 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 PPP3R1P63098 170 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 HBA1P69905 142 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 ERHP84090 104 aaKnown RBP1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 MIAQ16674 131 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 ATG2AQ2TAZ0 1938 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 ZNF791Q3KP31 576 aaPredicted RBP1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 PABPC1L2AQ5JQF8 200 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 ERICH3Q5RHP9 1530 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 FOCADQ5VW36 1801 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 IFT20Q8IY31 132 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 C8orf59Q8N0T1 100 aaPredicted RBP1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 TMEM229BQ8NBD8 167 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 TSTD1Q8NFU3 115 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 OR52R1Q8NGF1 315 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 NEO1Q92859 1461 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 KLK6Q92876 244 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 ARL11Q969Q4 196 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 ISOC1Q96CN7 298 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 ROBO3Q96MS0 1386 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 ERMAPQ96PL5 475 aaPredicted RBP1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 IMUPQ9GZP8 106 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 NIT2Q9NQR4 276 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 NAT8Q9UHE5 227 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 TMEM2Q9UHN6 1383 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 TRAPPC2LQ9UL33 140 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 HHLA3Q9XRX5 114 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 PKIGQ9Y2B9 76 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 LAMTOR2Q9Y2Q5 125 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 RAPGEF2Q9Y4G8 1499 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 SCN10AQ9Y5Y9 1956 aa1.53□□□□□ -2.16
TSPAN8-205ENST00000550818 MYH9P35579 1960 aaKnown RBP1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 AKAP11Q9UKA4 1901 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 CDK5RAP2Q96SN8 1893 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 SLX4Q8IY92 1834 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 PXDNLA1KZ92 1463 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 MED14O60244 1454 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 TROQ12816 1431 aaPredicted RBP1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 FMN1Q68DA7 1419 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 TRAV5A0A0B4J249 113 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 A0A1B0GW54 56 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 IFITM5A6NNB3 132 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 FABP5P3A8MUU1 101 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 C9JAW5 83 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 IFNA7P01567 189 aa1.52□□□□□ -2.17
TSPAN8-205ENST00000550818 SMIM10L2AP0DMW4 78 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms