RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 FCER2P06734 321 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 CTSDP07339 412 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 P0DMU3 169 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 FAM231AP0DMU4 169 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 FAM231CP0DMU5 169 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 CELP19835 753 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 HLA-DMBP28068 263 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 MAS1LP35410 378 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 RPL27AP46776 148 aaKnown RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 RPL5P46777 297 aaKnown RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 AKR1D1P51857 326 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 NKX2-5P52952 324 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 CMC4P56277 68 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 RPL30P62888 115 aaKnown RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 FLI1Q01543 452 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 INSL4Q14641 139 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 ACSM3Q53FZ2 586 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 PVRIGQ6DKI7 326 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 LAMTOR1Q6IAA8 161 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 Q6ZS49 121 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 SSX9Q7RTT3 188 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 H1FOOQ8IZA3 346 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 CBR4Q8N4T8 237 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 OR5B3Q8NH48 314 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 OR4A5Q8NH83 315 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 CD300LFQ8TDQ1 290 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 TMEM190Q8WZ59 177 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 PHYHIPQ92561 330 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 GGHQ92820 318 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 ZNF486Q96H40 463 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 ARHGAP5-AS1Q96IT6 56 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 CXorf58Q96LI9 332 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 OR2A7Q96R45 310 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 CMSS1Q9BQ75 279 aaKnown RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 SEC22CQ9BRL7 303 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 PECRQ9BY49 303 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 SLC5A7Q9GZV3 580 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 IFT46Q9NQC8 304 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 CCDC59Q9P031 241 aaKnown RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 RSL24D1Q9UHA3 163 aaKnown RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 SMPXQ9UHP9 88 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 RBMX2Q9Y388 322 aaKnown RBP2.52□□□□□ -2.01
LIMA1-206ENST00000550611 PRELID3BQ9Y3B1 194 aa2.52□□□□□ -2.01
LIMA1-206ENST00000550611 A0A0A6YYH2 397 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 IGHV3-35A0A0C4DH35 117 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 IGLC7A0M8Q6 106 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 IRGMA1A4Y4 181 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 A6NJ64 397 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 C15orf61A6NNL5 157 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 PMS2P5A8MQ11 134 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 SNURFLB1AK76 121 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 NDUFA4O00483 81 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 CHEK1O14757 476 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 TGOLN2O43493 480 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 CREBL2O60519 120 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-206ENST00000550611 DFFBO76075 338 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 KBTBD11O94819 623 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 HLA-DQB1P01920 261 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 AMBPP02760 352 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 FCGR3AP08637 254 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 RPA2P15927 270 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 GPR183P32249 361 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 ALDH3B2P48448 385 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 CDC34P49427 236 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-206ENST00000550611 MEOX2P50222 304 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 TAS2R43P59537 309 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 TAS2R60P59551 318 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 OR2B8PP59922 312 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 HERV-K104P61576 105 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 ARFRP1Q13795 201 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 TMEM187Q14656 261 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 OPCMLQ14982 345 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 USF2Q15853 346 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-206ENST00000550611 SSX1Q16384 188 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 C12orf74Q32Q52 190 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 KIAA1644Q3SXP7 199 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 FFAR4Q5NUL3 377 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 TTC23Q5W5X9 447 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 LAIR2Q6ISS4 152 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 ZFP1Q6P2D0 407 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 PLET1Q6UQ28 207 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 KCTD9Q7L273 389 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 VKORC1L1Q8N0U8 176 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 CENPSQ8N2Z9 138 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 LRTM2Q8N967 370 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 CSNK1G2-AS1Q8NCQ2 148 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 OR6M1Q8NGM8 313 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 OR10J5Q8NHC4 309 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 VSTM2AQ8TAG5 236 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 VN1R17PQ8TDU5 208 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 TMEM80Q96HE8 168 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 OR10C1Q96KK4 312 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 RNF2Q99496 336 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 TCEAL7Q9BRU2 100 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 CHRDL1Q9BU40 450 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 PDCD10Q9BUL8 212 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 SCRT1Q9BWW7 348 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 Q9H521 79 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 DAZ1Q9NQZ3 744 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms