RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 HLA-DRB4X5D2U9 266 aa16.61■□□□□ 0.25
SMARCD1-209ENST00000550477 TEX48A0A1B0GUV7 120 aa16.6■□□□□ 0.25
SMARCD1-209ENST00000550477 CRYM-AS1A6NIL9 109 aa16.6■□□□□ 0.25
SMARCD1-209ENST00000550477 IFNA21P01568 189 aa16.6■□□□□ 0.25
SMARCD1-209ENST00000550477 KLF9Q13886 244 aaPredicted RBP16.6■□□□□ 0.25
SMARCD1-209ENST00000550477 LHFPL5Q8TAF8 219 aa16.6■□□□□ 0.25
SMARCD1-209ENST00000550477 IL22RA2Q969J5 263 aa16.6■□□□□ 0.25
SMARCD1-209ENST00000550477 GPR132Q9UNW8 380 aa16.6■□□□□ 0.25
SMARCD1-209ENST00000550477 TMEM56-RWDD3S4R434 201 aa16.6■□□□□ 0.25
SMARCD1-209ENST00000550477 AKAIN1P0CW23 69 aa16.59■□□□□ 0.25
SMARCD1-209ENST00000550477 PSG1P11464 419 aa16.59■□□□□ 0.25
SMARCD1-209ENST00000550477 ATP5IP56385 69 aaPredicted RBP16.59■□□□□ 0.25
SMARCD1-209ENST00000550477 RNF125Q96EQ8 232 aa16.59■□□□□ 0.25
SMARCD1-209ENST00000550477 PBDC1Q9BVG4 233 aa16.59■□□□□ 0.25
SMARCD1-209ENST00000550477 PIGBOS1A0A0B4J2F0 54 aa16.58■□□□□ 0.24
SMARCD1-209ENST00000550477 CTF1Q16619 201 aa16.58■□□□□ 0.24
SMARCD1-209ENST00000550477 NMSQ5H8A3 153 aa16.58■□□□□ 0.24
SMARCD1-209ENST00000550477 OR8G2PQ6IF36 304 aa16.58■□□□□ 0.24
SMARCD1-209ENST00000550477 LGI3Q8N145 548 aa16.58■□□□□ 0.24
SMARCD1-209ENST00000550477 FAM210BQ96KR6 192 aa16.58■□□□□ 0.24
SMARCD1-209ENST00000550477 LINC00052Q96N35 136 aa16.58■□□□□ 0.24
SMARCD1-209ENST00000550477 ZFP92A6NM28 416 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 NXPH3O95157 252 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 CCR6P51684 374 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 EMP1P54849 157 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 SPATA31B1PQ5VZV4 182 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 FAAP20Q6NZ36 180 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 UBE2DNLQ8IWF7 75 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 COQ8AQ8NI60 647 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 DTD1Q8TEA8 209 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 SCP2D1Q9UJQ7 156 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 RFNGQ9Y644 331 aa16.57■□□□□ 0.24
SMARCD1-209ENST00000550477 IGHV3OR16-12A0A075B7B8 117 aa16.56■□□□□ 0.24
SMARCD1-209ENST00000550477 ANXA3P12429 323 aa16.56■□□□□ 0.24
SMARCD1-209ENST00000550477 SAMD13Q5VXD3 122 aa16.56■□□□□ 0.24
SMARCD1-209ENST00000550477 ZNF705AQ6ZN79 300 aaPredicted RBP16.56■□□□□ 0.24
SMARCD1-209ENST00000550477 FOXI2Q6ZQN5 318 aa16.56■□□□□ 0.24
SMARCD1-209ENST00000550477 SMIM4Q8WVI0 70 aa16.56■□□□□ 0.24
SMARCD1-209ENST00000550477 PPP1R14BQ96C90 147 aa16.56■□□□□ 0.24
SMARCD1-209ENST00000550477 SLC35E1Q96K37 410 aa16.56■□□□□ 0.24
SMARCD1-209ENST00000550477 VPS13DQ5THJ4 4388 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 PRSS29PA6NIE9 313 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 SNRPGP15A8MWD9 76 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 GPX4P36969 197 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 IL18Q14116 193 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 SMCO1Q147U7 214 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 C1orf194Q5T5A4 169 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 CLVS1Q8IUQ0 354 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 OR4B1Q8NGF8 309 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 OR4C16Q8NGL9 310 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 TMEM170AQ8WVE7 144 aa16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 NAA50Q9GZZ1 169 aaKnown RBP16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 SAV1Q9H4B6 383 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-209ENST00000550477 A0A0B4J2A0 478 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 ZNF705FA8MVS1 300 aaPredicted RBP16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 CTDSPLO15194 276 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 IGKV3-20P01619 116 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 ZNF705DP0CH99 300 aaPredicted RBP16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 ZNF705BP0CI00 300 aaPredicted RBP16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 MED14OSP0DP75 135 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 PSMB3P49720 205 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 SRPXP78539 464 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 LGALS9BQ3B8N2 356 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 EBLN2Q6P2I7 272 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 OR51S1Q8NGJ8 323 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 DIRAS2Q96HU8 199 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 CLUHP3Q96NS8 147 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 C7orf50Q9BRJ6 194 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 HSPB7Q9UBY9 170 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 SHPKQ9UHJ6 478 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 GOLT1BQ9Y3E0 138 aa16.54■□□□□ 0.24
SMARCD1-209ENST00000550477 M0R2N4 97 aa16.53■□□□□ 0.24
SMARCD1-209ENST00000550477 SUPT4H1P63272 117 aaKnown RBP16.53■□□□□ 0.24
SMARCD1-209ENST00000550477 SOHLH1Q5JUK2 328 aa16.53■□□□□ 0.24
SMARCD1-209ENST00000550477 NIPSNAP3BQ9BS92 247 aa16.53■□□□□ 0.24
SMARCD1-209ENST00000550477 AKR1C4P17516 323 aa16.52■□□□□ 0.24
SMARCD1-209ENST00000550477 RAB11AP62491 216 aa16.52■□□□□ 0.24
SMARCD1-209ENST00000550477 OR8I2Q8N0Y5 310 aa16.52■□□□□ 0.24
SMARCD1-209ENST00000550477 OR1S1Q8NH92 325 aa16.52■□□□□ 0.24
SMARCD1-209ENST00000550477 MIXL1Q9H2W2 232 aa16.52■□□□□ 0.24
SMARCD1-209ENST00000550477 RBKSQ9H477 322 aa16.52■□□□□ 0.24
SMARCD1-209ENST00000550477 HERC2O95714 4834 aa16.51■□□□□ 0.23
SMARCD1-209ENST00000550477 CTDSP2O14595 271 aa16.51■□□□□ 0.23
SMARCD1-209ENST00000550477 HBE1P02100 147 aa16.51■□□□□ 0.23
SMARCD1-209ENST00000550477 S100A7P31151 101 aa16.51■□□□□ 0.23
SMARCD1-209ENST00000550477 FXYD7P58549 80 aa16.51■□□□□ 0.23
SMARCD1-209ENST00000550477 LYZP61626 148 aa16.51■□□□□ 0.23
SMARCD1-209ENST00000550477 GAMTQ14353 236 aa16.51■□□□□ 0.23
SMARCD1-209ENST00000550477 DNAH6Q9C0G6 4158 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 ISLRO14498 428 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 CFDP00746 253 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 MEOX2P50222 304 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 PSG9Q00887 426 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 OXA1LQ15070 435 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 GPR141Q7Z602 305 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 RPRMQ9NS64 109 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 MCUBQ9NWR8 336 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 DKK2Q9UBU2 259 aa16.5■□□□□ 0.23
SMARCD1-209ENST00000550477 GDF5OSQ5U4N7 250 aa16.49■□□□□ 0.23
SMARCD1-209ENST00000550477 FAM222AQ5U5X8 452 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms