RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 PFDN5Q99471 154 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 FAM3BP58499 235 aaPredicted RBP16.52■□□□□ 0.23
PRDM4-205ENST00000550376 BCL6BQ8N143 479 aaPredicted RBP16.52■□□□□ 0.23
PRDM4-205ENST00000550376 OR51M1Q9H341 326 aa16.52■□□□□ 0.23
PRDM4-205ENST00000550376 TBL2Q9Y4P3 447 aaKnown RBP16.52■□□□□ 0.23
PRDM4-205ENST00000550376 A0A0U1RQK1 487 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 ZNF98A6NK75 572 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 OOSP1A8MZH6 123 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 K7EN84 100 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 TRGC2P03986 189 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 IGHV4-38-2P0DP08 117 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 GALR1P47211 349 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 RANP62826 216 aaKnown RBP16.51■□□□□ 0.23
PRDM4-205ENST00000550376 PAX8Q06710 450 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 OR5I1Q13606 314 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 MRPL32Q9BYC8 188 aaKnown RBP16.51■□□□□ 0.23
PRDM4-205ENST00000550376 TMEM242Q9NWH2 141 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 VWC2LB2RUY7 222 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 HYPMO75409 117 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 RASL11BQ9BPW5 248 aa16.51■□□□□ 0.23
PRDM4-205ENST00000550376 KLF2Q9Y5W3 355 aaPredicted RBP16.51■□□□□ 0.23
PRDM4-205ENST00000550376 SGK494Q96LW2 274 aa16.5■□□□□ 0.23
PRDM4-205ENST00000550376 OR2J3O76001 311 aa16.5■□□□□ 0.23
PRDM4-205ENST00000550376 PFN1P07737 140 aaKnown RBP16.5■□□□□ 0.23
PRDM4-205ENST00000550376 FXYD5Q96DB9 178 aa16.5■□□□□ 0.23
PRDM4-205ENST00000550376 CTDSP1Q9GZU7 261 aa16.5■□□□□ 0.23
PRDM4-205ENST00000550376 A0A1W2PPQ1 181 aa16.49■□□□□ 0.23
PRDM4-205ENST00000550376 KRTAP10-9P60411 292 aa16.49■□□□□ 0.23
PRDM4-205ENST00000550376 ECSCRQ19T08 205 aa16.49■□□□□ 0.23
PRDM4-205ENST00000550376 NHLRC2Q8NBF2 726 aa16.49■□□□□ 0.23
PRDM4-205ENST00000550376 RD3LP0DJH9 198 aa16.49■□□□□ 0.23
PRDM4-205ENST00000550376 TXNDC17Q9BRA2 123 aa16.49■□□□□ 0.23
PRDM4-205ENST00000550376 TMUB1Q9BVT8 246 aa16.49■□□□□ 0.23
PRDM4-205ENST00000550376 ELOA3CA0A087WX78 387 aaPredicted RBP16.48■□□□□ 0.23
PRDM4-205ENST00000550376 HELTA6NFD8 242 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 NDUFB8O95169 186 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 GNG5P63218 68 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 BIN3Q9NQY0 253 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 TRAV34A0A0B4J273 112 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 IGHV3-35A0A0C4DH35 117 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 S100A6P06703 90 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 BRS3P32247 399 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 LINC00527Q9UJ94 153 aa16.48■□□□□ 0.23
PRDM4-205ENST00000550376 IGHV3OR16-8A0A075B7F1 116 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 G3V318 75 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 CENPWQ5EE01 88 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 C7orf69Q9H7B7 122 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 IGLV11-55A0A075B6I3 123 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 SLC17A3O00476 420 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 COX6B1P14854 86 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 C11orf52Q96A22 123 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 SFRP2Q96HF1 295 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 RNF2Q99496 336 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 SRSF8Q9BRL6 282 aaKnown RBP16.47■□□□□ 0.23
PRDM4-205ENST00000550376 RPH3ALQ9UNE2 315 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 APCP25054 2843 aa16.47■□□□□ 0.23
PRDM4-205ENST00000550376 OR5B12Q96R08 314 aa16.46■□□□□ 0.23
PRDM4-205ENST00000550376 C12orf57Q99622 126 aa16.46■□□□□ 0.23
PRDM4-205ENST00000550376 IGHV1-69DA0A0B4J2H0 117 aa16.46■□□□□ 0.23
PRDM4-205ENST00000550376 ATP6V0E1O15342 81 aa16.46■□□□□ 0.23
PRDM4-205ENST00000550376 AVPP01185 164 aa16.46■□□□□ 0.23
PRDM4-205ENST00000550376 IGHV1-69P01742 117 aa16.46■□□□□ 0.23
PRDM4-205ENST00000550376 C1QL4Q86Z23 238 aa16.46■□□□□ 0.23
PRDM4-205ENST00000550376 A0A1W2PRE2 83 aa16.45■□□□□ 0.22
PRDM4-205ENST00000550376 TTC9CQ8N5M4 171 aa16.45■□□□□ 0.22
PRDM4-205ENST00000550376 HIGD1AQ9Y241 93 aa16.45■□□□□ 0.22
PRDM4-205ENST00000550376 POLR3KQ9Y2Y1 108 aaPredicted RBP16.45■□□□□ 0.22
PRDM4-205ENST00000550376 OR2T8A6NH00 312 aa16.45■□□□□ 0.22
PRDM4-205ENST00000550376 LY6EQ16553 131 aa16.45■□□□□ 0.22
PRDM4-205ENST00000550376 Q56UQ5 140 aa16.45■□□□□ 0.22
PRDM4-205ENST00000550376 NPIPB5A8MRT5 1133 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 F8W735 103 aaPredicted RBP16.44■□□□□ 0.22
PRDM4-205ENST00000550376 GNG7O60262 68 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 NDUFS6O75380 124 aaKnown RBP16.44■□□□□ 0.22
PRDM4-205ENST00000550376 IL4P05112 153 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 GNG4P50150 75 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 FABP9Q0Z7S8 132 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 UNQ5815/PRO19632Q6UWF5 114 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 ZNF329Q86UD4 541 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 ANAPC16Q96DE5 110 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 SLC25A39Q9BZJ4 359 aaPredicted RBP16.44■□□□□ 0.22
PRDM4-205ENST00000550376 HIF1ANQ9NWT6 349 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 C1RLQ9NZP8 487 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 MXRA5Q9NR99 2828 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 TEX15Q9BXT5 2789 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 NDUFS8O00217 210 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 TEX38Q6PEX7 206 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 PIFOQ8TCI5 191 aa16.44■□□□□ 0.22
PRDM4-205ENST00000550376 MDFIC2A0A1B0GVS7 189 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 C5orf52A6NGY3 159 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 NBEAP1P0C6P0 100 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 FRZBQ92765 325 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 MS4A10Q96PG2 267 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 TRBV24-1A0A075B6N3 115 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 MSMBP08118 114 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 C17orf77Q96MU5 243 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 RNASE7Q9H1E1 156 aaKnown RBP16.43■□□□□ 0.22
PRDM4-205ENST00000550376 FBXL7Q9UJT9 491 aa16.43■□□□□ 0.22
PRDM4-205ENST00000550376 ZNF469Q96JG9 3925 aaPredicted RBP16.43■□□□□ 0.22
PRDM4-205ENST00000550376 PGPA6NDG6 321 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms