RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 OR51G1Q8NGK1 321 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 OR1S1Q8NH92 325 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 GLMPQ8WWB7 406 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 ACY3Q96HD9 319 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 SLC35E1Q96K37 410 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 C1QTNF4Q9BXJ3 329 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 RBKSQ9H477 322 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 NRN1Q9NPD7 142 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 ZFP92A6NM28 416 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 SNRPGP15A8MWD9 76 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 FAM90A26D6RGX4 464 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 CFDP00746 253 aaPredicted RBP7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 S100A7P31151 101 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 SUPT4H1P63272 117 aaKnown RBP7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 ACTL10Q5JWF8 245 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 C1orf194Q5T5A4 169 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 SAMD13Q5VXD3 122 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 SIGLEC15Q6ZMC9 328 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 LRTM2Q8N967 370 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 C2CD4CQ8TF44 421 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 TMEM170AQ8WVE7 144 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 CIB3Q96Q77 187 aaPredicted RBP7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 RAB40CQ96S21 281 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 FBXL17Q9UF56 701 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 TMED3Q9Y3Q3 217 aa7.94□□□□□ -1.14
VTI1BP3-201ENST00000550220 ZNF705EA8MWA4 302 aaPredicted RBP7.93□□□□□ -1.14
VTI1BP3-201ENST00000550220 NXPH3O95157 252 aa7.93□□□□□ -1.14
VTI1BP3-201ENST00000550220 PSG1P11464 419 aa7.93□□□□□ -1.14
VTI1BP3-201ENST00000550220 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
VTI1BP3-201ENST00000550220 USF2Q15853 346 aaPredicted RBP7.93□□□□□ -1.14
VTI1BP3-201ENST00000550220 PSMG4Q5JS54 123 aa7.93□□□□□ -1.14
VTI1BP3-201ENST00000550220 TMED4Q7Z7H5 227 aa7.93□□□□□ -1.14
VTI1BP3-201ENST00000550220 RNF125Q96EQ8 232 aa7.93□□□□□ -1.14
VTI1BP3-201ENST00000550220 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 KNCNA6PVL3 124 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 PITX3O75364 302 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 GIG44P09565 113 aaPredicted RBP7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 ID1P41134 155 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 NKX2-1P43699 371 aaPredicted RBP7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 UBE2MP61081 183 aaKnown RBP7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 GAMTQ14353 236 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 SPATA31B1PQ5VZV4 182 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 GGNBP1Q5YKI7 109 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 Q8NAQ8 132 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 TRGV9Q99603 122 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 PRR13Q9NZ81 148 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 TBC1D24Q9ULP9 559 aa7.92□□□□□ -1.14
VTI1BP3-201ENST00000550220 PLECQ15149 4684 aaKnown RBP7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 CCDC160A6NGH7 325 aa7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 ZNF701M0R085 212 aaPredicted RBP7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 SFT2D2O95562 160 aa7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 VAMP1P23763 118 aa7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 SPANXN2Q5MJ10 180 aa7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 TRIM63Q969Q1 353 aa7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 PBDC1Q9BVG4 233 aa7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 V9GYH0 126 aa7.91□□□□□ -1.14
VTI1BP3-201ENST00000550220 IGHV4-28A0A0C4DH34 117 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 NAP1L6A6NFF2 107 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 H3BMM0 161 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 SYNGR2O43760 224 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 INPP1P49441 399 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 CCDC190Q86UF4 302 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 CSNK1G2-AS1Q8NCQ2 148 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 PPP1R14BQ96C90 147 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 CLUHP3Q96NS8 147 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 SLC45A2Q9UMX9 530 aa7.9□□□□□ -1.14
VTI1BP3-201ENST00000550220 BIRC6Q9NR09 4857 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 IGKV1D-37A0A075B6S9 117 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 TRAV10A0A0B4J240 114 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 SMIM9A6NGZ8 99 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 DEFB4AO15263 64 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 HLA-DRB4P13762 266 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 C4BPBP20851 252 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 PSMB3P49720 205 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 MEOX2P50222 304 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 LYZP61626 148 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 ZNF90Q03938 601 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 FOXI2Q6ZQN5 318 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 OR8I2Q8N0Y5 310 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 THAP8Q8NA92 274 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 COQ8AQ8NI60 647 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 PAIP2BQ9ULR5 123 aaKnown RBP7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 HLA-DRB4X5D2U9 266 aa7.89□□□□□ -1.15
VTI1BP3-201ENST00000550220 HYDINQ4G0P3 5121 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 TMEM189A5PLL7 270 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 CENPXA8MT69 81 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 IGLL5B9A064 214 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 ISLRO14498 428 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 RBMY1A1P0DJD3 496 aaKnown RBP7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 RBMY1CP0DJD4 496 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 IAPPP10997 89 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 HLA-DMBP28068 263 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 GALR1P47211 349 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 PPP1R1AQ13522 171 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 RBMY1FQ15415 496 aaKnown RBP7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 CNPY1Q3B7I2 92 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 EBLN2Q6P2I7 272 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 S100A7AQ86SG5 101 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 LINC00052Q96N35 136 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 GPR82Q96P67 336 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms