RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 GPX1P07203 203 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 CTSDP07339 412 aaPredicted RBP1.72□□□□□ -2.13
SNRPF-202ENST00000549580 OGNP20774 298 aaKnown RBP1.72□□□□□ -2.13
SNRPF-202ENST00000549580 NFYBP25208 207 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 RNASE4P34096 147 aaKnown RBP1.72□□□□□ -2.13
SNRPF-202ENST00000549580 PSMD8P48556 350 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 KRTAP13-4Q3LI77 160 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 PCOTHQ58A44 107 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 C22orf39Q6P5X5 142 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 ZNF826PQ6ZT77 177 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 C9orf163Q8N9P6 203 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 NUP35Q8NFH5 326 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 OR2T10Q8NGZ9 312 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 OR10J5Q8NHC4 309 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 DYDC1Q8WWB3 177 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 MBD3L1Q8WWY6 194 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 PLEKHB2Q96CS7 222 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 DDA1Q9BW61 102 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 MAP1LC3BQ9GZQ8 125 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 SMARCA4P51532 1647 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 IGKV1D-42A0A075B6H8 117 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 GNG14A0A1W2PPG7 69 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 PCNX2A6NKB5 2137 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 F8W036 122 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 M0R378 163 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 PIAS1O75925 651 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 IFNA14P01570 189 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 FKBP2P26885 142 aaKnown RBP1.71□□□□□ -2.14
SNRPF-202ENST00000549580 AKR1C3P42330 323 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 UBE2BP63146 152 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 TMEM78Q5T7P6 136 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 AKAP14Q86UN6 197 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 PRADC1Q9BSG0 188 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 TAS2R4Q9NYW5 299 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 LAMTOR3Q9UHA4 124 aa1.71□□□□□ -2.14
SNRPF-202ENST00000549580 MYH2Q9UKX2 1941 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 MDC1Q14676 2089 aaKnown RBP1.7□□□□□ -2.14
SNRPF-202ENST00000549580 NDUFB3O43676 98 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 CSN2P05814 226 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 MYL5Q02045 173 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 Q1T7F1 81 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 BRMS1LQ5PSV4 323 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 CROCCP2Q86T23 111 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 TAC4Q86UU9 113 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 RPS19BP1Q86WX3 136 aaKnown RBP1.7□□□□□ -2.14
SNRPF-202ENST00000549580 PHF13Q86YI8 300 aaPredicted RBP1.7□□□□□ -2.14
SNRPF-202ENST00000549580 PDZD9Q8IXQ8 264 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 IFT20Q8IY31 132 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 SLC30A7Q8NEW0 376 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 TEX37Q96LM6 180 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 SLC50A1Q9BRV3 221 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 MRPL32Q9BYC8 188 aaKnown RBP1.7□□□□□ -2.14
SNRPF-202ENST00000549580 TMEM126AQ9H061 195 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 MED11Q9P086 117 aa1.7□□□□□ -2.14
SNRPF-202ENST00000549580 TMEM256-PLSCR3K7ERE1 68 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 CRPP02741 224 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 TRGC2P03986 189 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 BAALC-AS2P0C853 105 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 MGST1P10620 155 aaKnown RBP1.69□□□□□ -2.14
SNRPF-202ENST00000549580 GPX2P18283 190 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 DYNLT1P63172 113 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 ZNF846Q147U1 533 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 LTC4SQ16873 150 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 COA5Q86WW8 74 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 OR10K1Q8NGX5 313 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 PPTC7Q8NI37 304 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 GPX7Q96SL4 187 aaPredicted RBP1.69□□□□□ -2.14
SNRPF-202ENST00000549580 BCL2L10Q9HD36 194 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 MYH3P11055 1940 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 NUMA1Q14980 2115 aa1.69□□□□□ -2.14
SNRPF-202ENST00000549580 TLCD2A6NGC4 264 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 E7EQ34 232 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 OR2T1O43869 369 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 PROSCO94903 275 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 DYNLT3P51808 116 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 ESRGQ1W209 222 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 EIF5AL1Q6IS14 154 aaKnown RBP1.68□□□□□ -2.14
SNRPF-202ENST00000549580 Q6ZRN7 208 aaPredicted RBP1.68□□□□□ -2.14
SNRPF-202ENST00000549580 SLC25A21Q9BQT8 299 aaPredicted RBP1.68□□□□□ -2.14
SNRPF-202ENST00000549580 CCDC32Q9BV29 185 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 RTL8AQ9BWD3 113 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 OBSL1O75147 1896 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 RIMBP3CA6NJZ7 1639 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 RIMBP3BA6NNM3 1639 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 RIMBP3Q9UFD9 1639 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 ZFHX2Q9C0A1 2572 aaPredicted RBP1.68□□□□□ -2.14
SNRPF-202ENST00000549580 ANKRD30AQ9BXX3 1397 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 MYH7BA7E2Y1 1941 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 GLI3P10071 1580 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 DENND4CQ5VZ89 1909 aa1.68□□□□□ -2.14
SNRPF-202ENST00000549580 TRAV3A0A0B4J244 114 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 TRAV1-1A0A0B4J248 108 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 A0A1W2PRE2 83 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 A8MWV9 139 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 TSTD3H0UI37 97 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 H3BQV1 296 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 UBL3O95164 117 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 ASAH2BP0C7U1 165 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms