RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 C10orf55Q5SWW7 151 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 LDLRAD2Q5SZI1 272 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 NDUFA11Q86Y39 141 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 Q8N6K4 173 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 OR10W1Q8NGF6 305 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 OR10G4Q8NGN3 311 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 OR10G9Q8NGN4 311 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 OR10G7Q8NGN6 311 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 OR1L4Q8NGR5 311 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 OR5R1Q8NH85 324 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 SFT2D1Q8WV19 159 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 NARS2Q96I59 477 aaKnown RBP5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 RITA1Q96K30 269 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 RBM14Q96PK6 669 aaKnown RBP5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 P2RX4Q99571 388 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 SSX3Q99909 188 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 CITED2Q99967 270 aaPredicted RBP5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 SLC25A33Q9BSK2 321 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 TREM1Q9NP99 234 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 PLXNB1O43157 2135 aa5.57□□□□□ -1.52
DEPDC4-208ENST00000549341 DNAH7Q8WXX0 4024 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 TRAV1-1A0A0B4J248 108 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 LCE6AA0A183 80 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 CTXND1A0A1B0GTU2 59 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 IGLC7A0M8Q6 106 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 ZFP92A6NM28 416 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 NPIPB5A8MRT5 1133 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 PRSS46E5RG02 174 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 AGPAT2O15120 278 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 PF4P02776 101 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 CD24P25063 80 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 CDC34P49427 236 aaPredicted RBP5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 TAS2R45P59539 299 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 B2MP61769 119 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 CX3CL1P78423 397 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 WT1-ASQ06250 92 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 Q8N9W7 124 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 LYPD6BQ8NI32 183 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 MBD3L1Q8WWY6 194 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 DPF1Q92782 380 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 ACY3Q96HD9 319 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 PFDN5Q99471 154 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 GGTLC1Q9BX51 225 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 WNT10AQ9GZT5 417 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 EIF5A2Q9GZV4 153 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 RNF24Q9Y225 148 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 PXMP4Q9Y6I8 212 aa5.56□□□□□ -1.52
DEPDC4-208ENST00000549341 STARD9Q9P2P6 4700 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 TRAV30A0A087WSZ9 112 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 A0A1B0GW64 132 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 ANKRD34BA5PLL1 514 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 MAP1LC3B2A6NCE7 125 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 CGB1A6NKQ9 187 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 TEX22C9J3V5 150 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 FCN1O00602 326 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 REG1AP05451 166 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 CRYGCP07315 174 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 CTRB1P17538 263 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 ZP3P21754 424 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 NPBWR1P48145 328 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 MFAP4P55083 255 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 RHOBP62745 196 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 GAMTQ14353 236 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 GUK1Q16774 197 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 PVRIGQ6DKI7 326 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 CTRB2Q6GPI1 263 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 ACSM6Q6P461 480 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 FAM122CQ6P4D5 195 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 CYP2G1PQ6ZSU1 146 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 DYNAPQ8N1N2 210 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 TTC9CQ8N5M4 171 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 BPIFCQ8NFQ6 507 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 MUC7Q8TAX7 377 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 TMEM170AQ8WVE7 144 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 MGST2Q99735 147 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 NPFFR1Q9GZQ6 430 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 MAP1LC3BQ9GZQ8 125 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 RPRMQ9NS64 109 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 C19orf73Q9NVV2 129 aa5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 LSM4Q9Y4Z0 139 aaKnown RBP5.55□□□□□ -1.52
DEPDC4-208ENST00000549341 TCRBV4S1A1TA0A5B7 111 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 E7EUB6 86 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 CXorf1O96002 111 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 AREGP15514 252 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 PAX6P26367 422 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 OR10J1P30954 320 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 PSMB3P49720 205 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 RND2P52198 227 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 MRGPRG-AS1Q2M3A8 158 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 KHDC3LQ587J8 217 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 KHDC1LQ5JSQ8 128 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 UNQ5815/PRO19632Q6UWF5 114 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 LCN15Q6UWW0 184 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 IQCF2Q8IXL9 164 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 STPG3Q8N7X2 389 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 C5orf56Q8N8D9 126 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 THAP8Q8NA92 274 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 TMEM116Q8NCL8 245 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 OR4X1Q8NH49 305 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms