RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 LIMS3P0CW19 117 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 LIMS4P0CW20 117 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 SLC2A1P11166 492 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 PSKH1P11801 424 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 HIST1H1CP16403 213 aaKnown RBP2.23□□□□□ -2.05
PTCH1-216ENST00000548379 NUDT2P50583 147 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 EDDM3BP56851 147 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 BLCAPP62952 87 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 GNG3P63215 75 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 FAM3AP98173 230 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 PRDX4Q13162 271 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 MED21Q13503 144 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 CEACAM21Q3KPI0 293 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 COQ5Q5HYK3 327 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 MINOS1Q5TGZ0 78 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 LCN8Q6JVE9 175 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 TBPL2Q6SJ96 375 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 TRAPPC6BQ86SZ2 158 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 DRAM1Q8N682 238 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF676Q8N7Q3 588 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 ST20-AS1Q8NBB2 130 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 OR5P3Q8WZ94 311 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 ITFG2Q969R8 447 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 ISOC1Q96CN7 298 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 TMED9Q9BVK6 235 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 TLNRD1Q9H1K6 362 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 C19orf12Q9NSK7 152 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 DNAJC27Q9NZQ0 273 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 HILPDAQ9Y5L2 63 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 ORC6Q9Y5N6 252 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 MINOS1-NBL1R4GNA1 71 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 TENM1Q9UKZ4 2725 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 IGKV1D-17A0A075B6S4 117 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 IGHV3-49A0A0A0MS15 119 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 A0A0G2JND7 137 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 FUOMA2VDF0 154 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 RFPL4AA6NLU0 287 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 RIIAD1A6NNX1 92 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 LEUTXA8MZ59 168 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 RFPL4AL1F8VTS6 287 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 CXCR6O00574 342 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 FFAR1O14842 300 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 FGF16O43320 207 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 GADD45GO95257 159 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 CYB5AP00167 134 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF728P0DKX0 622 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 PIPP12273 146 aaPredicted RBP2.22□□□□□ -2.05
PTCH1-216ENST00000548379 CCL3L1P16619 93 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 HLA-DMAP28067 261 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 RPS27P42677 84 aaKnown RBP2.22□□□□□ -2.05
PTCH1-216ENST00000548379 MAGEA2P43356 314 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 HAAOP46952 286 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 OMPP47874 163 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 GZMMP51124 257 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 INSL3P51460 131 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 ELF3P78545 371 aaPredicted RBP2.22□□□□□ -2.05
PTCH1-216ENST00000548379 MRPS15P82914 257 aaKnown RBP2.22□□□□□ -2.05
PTCH1-216ENST00000548379 MEF2CQ06413 473 aaPredicted RBP2.22□□□□□ -2.05
PTCH1-216ENST00000548379 HES1Q14469 280 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 C6orf99Q4VX62 202 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 TNFAIP8L3Q5GJ75 292 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 HCP5Q6MZN7 132 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 HAGHLQ6PII5 290 aaPredicted RBP2.22□□□□□ -2.05
PTCH1-216ENST00000548379 LINC00471Q8N535 108 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 RNF182Q8N6D2 247 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 OR11H6Q8NGC7 330 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 OR5A2Q8NGI9 324 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 GNPDA2Q8TDQ7 276 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 RTN4IP1Q8WWV3 396 aaPredicted RBP2.22□□□□□ -2.05
PTCH1-216ENST00000548379 AQP3Q92482 292 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF714Q96N38 554 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 FAM210AQ96ND0 272 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 APOL4Q9BPW4 351 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF2Q9BSG1 426 aaPredicted RBP2.22□□□□□ -2.05
PTCH1-216ENST00000548379 PLEKHJ1Q9NW61 149 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 C21orf62Q9NYP8 219 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 BAIAP2Q9UQB8 552 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 SLC22A13Q9Y226 551 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 ENPP4Q9Y6X5 453 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 HSPE1-MOB4S4R3N1 261 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 MPDZO75970 2070 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 NINQ8N4C6 2090 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 TRRAPQ9Y4A5 3859 aa2.22□□□□□ -2.05
PTCH1-216ENST00000548379 MED12LQ86YW9 2145 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 TRGV10A0A0A0MS01 117 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 IGHV2-26A0A0B4J1V2 119 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 IGHV1-3A0A0C4DH29 117 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 DHRS12A0PJE2 317 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 C17orf98A8MV24 154 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 ODF3BA8MYP8 253 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 OOSP1A8MZH6 123 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 M0R1X1 148 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 ATP8B1O43520 1251 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 NDUFS5O43920 106 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 NRASP01111 189 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 TFF1P04155 84 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 IFNA6P05013 189 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 IL4P05112 153 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 OCM2P0CE71 109 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 PYCR1P32322 319 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms