RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 HSPB9Q9BQS6 159 aa8.74□□□□□ -1.01
SCN8A-205ENST00000548086 FAM103A1Q9BTL3 118 aaKnown RBP8.74□□□□□ -1.01
SCN8A-205ENST00000548086 FOXA2Q9Y261 457 aaPredicted RBP8.74□□□□□ -1.01
SCN8A-205ENST00000548086 TEX50A0A1B0GTY4 177 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 LINC01548A6NM66 108 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 H7BYZ3 331 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 HMGB3O15347 200 aaKnown RBP8.73□□□□□ -1.01
SCN8A-205ENST00000548086 OPRK1P41145 380 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 ACTL10Q5JWF8 245 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 Q6ZS46 218 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 TMEM144Q7Z5S9 345 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 OR4F5Q8NH21 305 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 OR5R1Q8NH85 324 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 OR4F4Q96R69 305 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 TXNDC17Q9BRA2 123 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 ESM1Q9NQ30 184 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 PRNDQ9UKY0 176 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 MOB4Q9Y3A3 225 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 LSM4Q9Y4Z0 139 aaKnown RBP8.73□□□□□ -1.01
SCN8A-205ENST00000548086 PDE6DO43924 150 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 PAGE4O60829 102 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 GALR1P47211 349 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 BLCAPP62952 87 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 LINC01551Q86U37 167 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 MMD2Q8IY49 270 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 ZNF709Q8N972 641 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 OR4A5Q8NH83 315 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 SSMEM1Q8WWF3 244 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 IMMP2LQ96T52 175 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 ELOVL1Q9BW60 279 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 COMMD5Q9GZQ3 224 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 KCNIP2Q9NS61 270 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 CDC42EP3Q9UKI2 254 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 VPREB3Q9UKI3 123 aa8.73□□□□□ -1.01
SCN8A-205ENST00000548086 C11orf94C9JXX5 98 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 ACTL6BO94805 426 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 STAG3L2P0CL84 134 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 STAG3L3P0CL85 134 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 DEFA4P12838 97 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 FABP4P15090 132 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 HSPE1P61604 102 aaKnown RBP8.72□□□□□ -1.01
SCN8A-205ENST00000548086 CX3CL1P78423 397 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 C9orf152Q5JTZ5 239 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 OR1P1Q8NH06 330 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 ACY3Q96HD9 319 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 PACRGQ96M98 296 aaPredicted RBP8.72□□□□□ -1.01
SCN8A-205ENST00000548086 RASL11BQ9BPW5 248 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 C1RLQ9NZP8 487 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 TEP1Q99973 2627 aaKnown RBP8.72□□□□□ -1.01
SCN8A-205ENST00000548086 IGHV7-81A0A0B4J1V7 117 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 DNAJC9-AS1A6NH13 148 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 CNIH1O95406 144 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 REG1AP05451 166 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 COMPP49747 757 aaPredicted RBP8.72□□□□□ -1.01
SCN8A-205ENST00000548086 FXYD3Q14802 87 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 JOSD1Q15040 202 aaPredicted RBP8.72□□□□□ -1.01
SCN8A-205ENST00000548086 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 LINC00469Q8N7U9 141 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 SRSF12Q8WXF0 261 aaKnown RBP8.72□□□□□ -1.01
SCN8A-205ENST00000548086 MGST2Q99735 147 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 GGTLC1Q9BX51 225 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 NDUFA4L2Q9NRX3 87 aa8.72□□□□□ -1.01
SCN8A-205ENST00000548086 PPP5D1E7EU14 171 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 F6UZH7 168 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 AMBPP02760 352 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 AREGP15514 252 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 RPL27AP46776 148 aaKnown RBP8.71□□□□□ -1.02
SCN8A-205ENST00000548086 RPP30P78346 268 aaKnown RBP8.71□□□□□ -1.02
SCN8A-205ENST00000548086 PRCDQ00LT1 54 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 SRSF2Q01130 221 aaKnown RBP8.71□□□□□ -1.02
SCN8A-205ENST00000548086 FOXL1Q12952 345 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 PDZD11Q5EBL8 140 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 OR1L8Q8NGR8 309 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 OR5B12Q96R08 314 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 PFDN5Q99471 154 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 LINC00527Q9UJ94 153 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 ZNF257Q9Y2Q1 563 aa8.71□□□□□ -1.02
SCN8A-205ENST00000548086 NF1P21359 2839 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 TEX22C9J3V5 150 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 HLA-DRB1P01911 266 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 RPL15P61313 204 aaKnown RBP8.7□□□□□ -1.02
SCN8A-205ENST00000548086 WT1-ASQ06250 92 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 GAMTQ14353 236 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 TMEM95Q3KNT9 176 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 OR5B3Q8NH48 314 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 PLEKHA3Q9HB20 300 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 TRBV20OR9-2A0A075B6H5 130 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 FNDC10F2Z333 226 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 ATP6V0E1O15342 81 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 EGR2P11161 476 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-205ENST00000548086 ATP5G3P48201 142 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 PKIAP61925 76 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 ZNF562Q6V9R5 426 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 ARPC1AQ92747 370 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 HEYLQ9NQ87 328 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-205ENST00000548086 FKBP11Q9NYL4 201 aa8.7□□□□□ -1.02
SCN8A-205ENST00000548086 IGLC7A0M8Q6 106 aa8.69□□□□□ -1.02
SCN8A-205ENST00000548086 IFNA10P01566 189 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms