RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 GBGT1Q8N5D6 347 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 UBAC2Q8NBM4 344 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 GPHA2Q96T91 129 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 RNF126Q9BV68 326 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 BET1LQ9NYM9 111 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 IGHV3-49A0A0A0MS15 119 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 IGHV3-21A0A0B4J1V1 117 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 IGKV1D-13A0A0B4J2D9 117 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 C15orf61A6NNL5 157 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 IGKV1-13P0DP09 117 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 SLC25A24Q6NUK1 477 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 ARL6IP6Q8N6S5 226 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 OR10W1Q8NGF6 305 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 OR52I2Q8NH67 350 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 RHPN1-AS1Q9BWJ2 59 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 COMMD5Q9GZQ3 224 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 V9GY05 133 aa10.52□□□□□ -0.73
PTPRB-205ENST00000547715 IGHV7-4-1A0A0J9YVY3 117 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 GOSR2O14653 212 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 CHEK1O14757 476 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 TAAR5O14804 337 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 IFNA17P01571 189 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 EIF4EBP1Q13541 118 aaPredicted RBP10.51□□□□□ -0.73
PTPRB-205ENST00000547715 LEMD1Q68G75 181 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 TMEM116Q8NCL8 245 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 SMDT1Q9H4I9 107 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 C21orf62Q9NYP8 219 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 AGRNO00468 2067 aa10.51□□□□□ -0.73
PTPRB-205ENST00000547715 IGHV3OR16-13A0A075B7E8 117 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 IGHV3-74A0A0B4J1X5 117 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 TRAV3A0A0B4J244 114 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 SIX6O95475 246 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 AMBPP02760 352 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 CTXN2P0C2S0 81 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 OR13C7P0DN81 318 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 MIFP14174 115 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 TAS2R19P59542 299 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 UBE2MP61081 183 aaKnown RBP10.5□□□□□ -0.73
PTPRB-205ENST00000547715 PAFAH1B2P68402 229 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 MEF2DQ14814 521 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 LGALS9BQ3B8N2 356 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 Q56UQ5 140 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 ZNF66Q6ZN08 573 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 LGALS14Q8TCE9 139 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 RXFP4Q8TDU9 374 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 SRSF8Q9BRL6 282 aaKnown RBP10.5□□□□□ -0.73
PTPRB-205ENST00000547715 ZNF471Q9BX82 626 aaPredicted RBP10.5□□□□□ -0.73
PTPRB-205ENST00000547715 QTRT1Q9BXR0 403 aaKnown RBP10.5□□□□□ -0.73
PTPRB-205ENST00000547715 UQCC1Q9NVA1 299 aa10.5□□□□□ -0.73
PTPRB-205ENST00000547715 DEFB131BA0A096LNP1 70 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 F8W735 103 aaPredicted RBP10.49□□□□□ -0.73
PTPRB-205ENST00000547715 TNFSF12O43508 249 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 YIF1AO95070 293 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 SERPINE2P07093 398 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 CAV2P51636 162 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 TAS2R20P59543 309 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 TMEM229BQ8NBD8 167 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 NDUFAF3Q9BU61 184 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 FLVCR2Q9UPI3 526 aa10.49□□□□□ -0.73
PTPRB-205ENST00000547715 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 ELOA3CA0A087WX78 387 aaPredicted RBP10.48□□□□□ -0.73
PTPRB-205ENST00000547715 TEX13DA0A0J9YY54 714 aaPredicted RBP10.48□□□□□ -0.73
PTPRB-205ENST00000547715 COLCA2A8K830 154 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 GPR31O00270 319 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 UPK2O00526 184 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 RLN1P04808 185 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 CTSGP08311 255 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 PET100P0DJ07 73 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 ANXA7P20073 488 aaKnown RBP10.48□□□□□ -0.73
PTPRB-205ENST00000547715 TBPP20226 339 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 DTYMKP23919 212 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 H2BFSP57053 126 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 OR10A3P58181 314 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 TAS2R31P59538 309 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 DEFB131AP59861 70 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 WT1-ASQ06250 92 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 C4orf46Q504U0 113 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 FAM90A2PQ658T7 463 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 STHQ8IWL8 128 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 BAP18Q8IXM2 172 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 TREM1Q9NP99 234 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 TMED3Q9Y3Q3 217 aa10.48□□□□□ -0.73
PTPRB-205ENST00000547715 TRAV14DV4A0A0A6YYC5 116 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 A0A0B4J2A0 478 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 SCGNO76038 276 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 S100A2P29034 98 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 SPCS3P61009 180 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
PTPRB-205ENST00000547715 RHEBQ15382 184 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 TCF24Q7RTU0 167 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 PFDN5Q99471 154 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 SCRT1Q9BWW7 348 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 AUNIPQ9H7T9 357 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 SHPKQ9UHJ6 478 aa10.47□□□□□ -0.73
PTPRB-205ENST00000547715 ZNF705EA8MWA4 302 aaPredicted RBP10.46□□□□□ -0.73
PTPRB-205ENST00000547715 K7EIM0 57 aa10.46□□□□□ -0.73
PTPRB-205ENST00000547715 NQO2P16083 231 aa10.46□□□□□ -0.73
PTPRB-205ENST00000547715 RAB6AP20340 208 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms