RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CYBAP13498 195 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 PPIBP23284 216 aaKnown RBP2.57□□□□□ -2
SCAF11-210ENST00000547654 CRYBB3P26998 211 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 HBA1P69905 142 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 ALX1Q15699 326 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 C9orf64Q5T6V5 341 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 ZFAND6Q6FIF0 208 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 WDR59Q6PJI9 974 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 ZNF322Q6U7Q0 402 aaPredicted RBP2.57□□□□□ -2
SCAF11-210ENST00000547654 Q6ZS49 121 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 GRINAQ7Z429 371 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 OR11H1Q8NG94 326 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 FNDC9Q8TBE3 224 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 GPR119Q8TDV5 335 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 ZNF285Q96NJ3 590 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 GPER1Q99527 375 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 GINS3Q9BRX5 216 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 PARVBQ9HBI1 364 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 FBXL12Q9NXK8 326 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 SPTBN1Q01082 2364 aaKnown RBP2.57□□□□□ -2
SCAF11-210ENST00000547654 ATRQ13535 2644 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 CELSR2Q9HCU4 2923 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 SCN1AP35498 2009 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 PCM1Q15154 2024 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 CACNA1DQ01668 2161 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 SVILO95425 2214 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 TRAV9-1A0A075B6T8 112 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 A0A0J9YY10 115 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 TMEM269A0A1B0GVZ9 245 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 A0A1B0GX78 115 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 VPS37CA5D8V6 355 aaPredicted RBP2.56□□□□□ -2
SCAF11-210ENST00000547654 TRAPPC13A5PLN9 417 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 C16orf90A8MZG2 172 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 OR11H12B2RN74 326 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 I3L521 148 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 AIPO00170 330 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 ZNF324O75467 553 aaPredicted RBP2.56□□□□□ -2
SCAF11-210ENST00000547654 NDUFB2O95178 105 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 S100A7P31151 101 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 PHBP35232 272 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 GABRA2P47869 451 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 TAS2R20P59543 309 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 RBX1P62877 108 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 C12orf74Q32Q52 190 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 IBA57Q5T440 356 aaKnown RBP2.56□□□□□ -2
SCAF11-210ENST00000547654 ZNF660Q6AZW8 331 aaPredicted RBP2.56□□□□□ -2
SCAF11-210ENST00000547654 OSR2Q8N2R0 312 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 ZNF439Q8NDP4 499 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 OR11H2Q8NH07 326 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 MRPL30Q8TCC3 161 aaKnown RBP2.56□□□□□ -2
SCAF11-210ENST00000547654 RPS4Y2Q8TD47 263 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 TMEM70Q9BUB7 260 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 MCTS1Q9ULC4 181 aaKnown RBP2.56□□□□□ -2
SCAF11-210ENST00000547654 SSR3Q9UNL2 185 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 NBEAL1Q6ZS30 2694 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 MUC22E2RYF6 1773 aaPredicted RBP2.56□□□□□ -2
SCAF11-210ENST00000547654 MCM3APO60318 1980 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 SPAG17Q6Q759 2223 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 HIVEP3Q5T1R4 2406 aa2.56□□□□□ -2
SCAF11-210ENST00000547654 IGHV3-73A0A0B4J1V6 119 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 J3QKU1 62 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 SIPA1L1O43166 1804 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 PFDN1O60925 122 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 ZNF682O95780 498 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 FN1P02751 2386 aaKnown RBP2.55□□□□□ -2
SCAF11-210ENST00000547654 ZNF286BP0CG31 522 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 CPMP14384 443 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 HIVEP1P15822 2718 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 CBR1P16152 277 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 LPAR6P43657 344 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 RPL27AP46776 148 aaKnown RBP2.55□□□□□ -2
SCAF11-210ENST00000547654 CSN1S1P47710 185 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 SERPINB10P48595 397 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 YLPM1P49750 1951 aaKnown RBP2.55□□□□□ -2
SCAF11-210ENST00000547654 FXYD7P58549 80 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 GNG5P63218 68 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 PARP14Q460N5 1801 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 ERMAPQ96PL5 475 aaPredicted RBP2.55□□□□□ -2
SCAF11-210ENST00000547654 PBDC1Q9BVG4 233 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 C20orf27Q9GZN8 174 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 ABCG5Q9H222 651 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 MIXL1Q9H2W2 232 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 C11orf68Q9H3H3 251 aaKnown RBP2.55□□□□□ -2
SCAF11-210ENST00000547654 SMDT1Q9H4I9 107 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 C11orf1Q9H5F2 150 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 LYRM2Q9NU23 88 aaPredicted RBP2.55□□□□□ -2
SCAF11-210ENST00000547654 PRNDQ9UKY0 176 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 MED23Q9ULK4 1368 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 PLXNB3Q9ULL4 1909 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 KLK5Q9Y337 293 aaPredicted RBP2.55□□□□□ -2
SCAF11-210ENST00000547654 CSMD2Q7Z408 3487 aa2.55□□□□□ -2
SCAF11-210ENST00000547654 MED13LQ71F56 2210 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 CABIN1Q9Y6J0 2220 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 RYR3Q15413 4870 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 ROBO3Q96MS0 1386 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 A0A087WUU8 490 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 LOC105371267A0A1B0GV96 52 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 C17orf51A8MQB3 221 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 TSTD3H0UI37 97 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 H7C1C5 153 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms