RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 IGKV1D-37A0A075B6S9 117 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 PRSS46E5RG02 174 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 AP2S1P53680 142 aaPredicted RBP11.77□□□□□ -0.53
DDX54-204ENST00000546898 SPANXN5Q5MJ07 72 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 OR8G2PQ6IF36 304 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 C16orf54Q6UWD8 224 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 THAP8Q8NA92 274 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 RNF125Q96EQ8 232 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 TRGV9Q99603 122 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 NUDT15Q9NV35 164 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 PFDN2Q9UHV9 154 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 TP53TG1Q9Y2A0 90 aa11.77□□□□□ -0.53
DDX54-204ENST00000546898 TRAV6A0A075B6T7 132 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 H3BP45 60 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 POLR2GP62487 172 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDX54-204ENST00000546898 ASAH1Q13510 395 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 ZNF846Q147U1 533 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 IAH1Q2TAA2 248 aaPredicted RBP11.76□□□□□ -0.53
DDX54-204ENST00000546898 MZT2BQ6NZ67 158 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 Q6ZWC4 215 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 WFDC3Q8IUB2 231 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 APRG1Q8IVJ8 170 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 STPG3Q8N7X2 389 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 STXBP6Q8NFX7 210 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 GLMPQ8WWB7 406 aa11.76□□□□□ -0.53
DDX54-204ENST00000546898 FAM240BA0A1B0GVZ2 78 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 K7EQG2 157 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 SSSCA1O60232 199 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 CFDP00746 253 aaPredicted RBP11.75□□□□□ -0.53
DDX54-204ENST00000546898 LYL1P12980 280 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 ZBTB8BQ8NAP8 495 aaPredicted RBP11.75□□□□□ -0.53
DDX54-204ENST00000546898 ZNF431Q8TF32 576 aaPredicted RBP11.75□□□□□ -0.53
DDX54-204ENST00000546898 SMIM8Q96KF7 97 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 OVOL2Q9BRP0 275 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 BATF3Q9NR55 127 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 PSENENQ9NZ42 101 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 TBC1D24Q9ULP9 559 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 RYR3Q15413 4870 aa11.75□□□□□ -0.53
DDX54-204ENST00000546898 BUB3O43684 328 aa11.74□□□□□ -0.53
DDX54-204ENST00000546898 H2AFB2P0C5Z0 115 aa11.74□□□□□ -0.53
DDX54-204ENST00000546898 RPL35AP18077 110 aaKnown RBP11.74□□□□□ -0.53
DDX54-204ENST00000546898 ZNF90Q03938 601 aa11.74□□□□□ -0.53
DDX54-204ENST00000546898 ZNF124Q15973 351 aa11.74□□□□□ -0.53
DDX54-204ENST00000546898 CASC10Q5T4H9 136 aa11.74□□□□□ -0.53
DDX54-204ENST00000546898 DCANP1Q8TF63 244 aa11.74□□□□□ -0.53
DDX54-204ENST00000546898 RAB40CQ96S21 281 aa11.74□□□□□ -0.53
DDX54-204ENST00000546898 PBDC1Q9BVG4 233 aa11.74□□□□□ -0.53
DDX54-204ENST00000546898 IGKV1OR2-108A0A075B7D4 117 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 SNRPGP15A8MWD9 76 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 UPK1BO75841 260 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 SCGB1D2O95969 90 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 TAS2R30P59541 319 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 DEFB131AP59861 70 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 SIGLEC15Q6ZMC9 328 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 ACOT7LQ6ZUV0 252 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 CSMD3Q7Z407 3707 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 FAM24BQ8N5W8 94 aa11.73□□□□□ -0.53
DDX54-204ENST00000546898 SPRY2O43597 315 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 TSC22D2O75157 780 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 LYZP61626 148 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 AKR1C1Q04828 323 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 DEFB135Q30KP9 77 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 TMEM14EPQ6UXP3 125 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 C12orf45Q8N5I9 185 aaPredicted RBP11.72□□□□□ -0.53
DDX54-204ENST00000546898 IL17DQ8TAD2 202 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 SEC22CQ9BRL7 303 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 SEPSECSQ9HD40 501 aaKnown RBP11.72□□□□□ -0.53
DDX54-204ENST00000546898 NRN1Q9NPD7 142 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 GSKIPQ9P0R6 139 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 FBXL17Q9UF56 701 aa11.72□□□□□ -0.53
DDX54-204ENST00000546898 RCL1Q9Y2P8 373 aaKnown RBP11.72□□□□□ -0.53
DDX54-204ENST00000546898 PMS2P5A8MQ11 134 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 PAX9P55771 341 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 C1orf194Q5T5A4 169 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 LEMD1Q68G75 181 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 TMEM144Q7Z5S9 345 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 BPIFCQ8NFQ6 507 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 ENKURQ8TC29 256 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 RNF183Q96D59 192 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 CSTL1Q9H114 145 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 SLC45A2Q9UMX9 530 aa11.71□□□□□ -0.53
DDX54-204ENST00000546898 AGRNO00468 2067 aa11.71□□□□□ -0.54
DDX54-204ENST00000546898 FNDC10F2Z333 226 aa11.7□□□□□ -0.54
DDX54-204ENST00000546898 CCSO14618 274 aa11.7□□□□□ -0.54
DDX54-204ENST00000546898 MBPP02686 304 aaPredicted RBP11.7□□□□□ -0.54
DDX54-204ENST00000546898 IL5P05113 134 aa11.7□□□□□ -0.54
DDX54-204ENST00000546898 ZNF688P0C7X2 276 aa11.7□□□□□ -0.54
DDX54-204ENST00000546898 DLK1P80370 383 aa11.7□□□□□ -0.54
DDX54-204ENST00000546898 OR2F1Q13607 317 aa11.7□□□□□ -0.54
DDX54-204ENST00000546898 SMCO3A2RU48 225 aa11.69□□□□□ -0.54
DDX54-204ENST00000546898 FAM25EA8MYX2 175 aa11.69□□□□□ -0.54
DDX54-204ENST00000546898 S100A7P31151 101 aa11.69□□□□□ -0.54
DDX54-204ENST00000546898 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
DDX54-204ENST00000546898 STHQ8IWL8 128 aa11.69□□□□□ -0.54
DDX54-204ENST00000546898 OR10P1Q8NGE3 313 aa11.69□□□□□ -0.54
DDX54-204ENST00000546898 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
DDX54-204ENST00000546898 PPP1R14BQ96C90 147 aa11.69□□□□□ -0.54
DDX54-204ENST00000546898 C7orf66A4D0T2 115 aa11.68□□□□□ -0.54
DDX54-204ENST00000546898 C5orf51A6NDU8 294 aa11.68□□□□□ -0.54
DDX54-204ENST00000546898 L7N2F9 121 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms