RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 AKR1C2P52895 323 aa8.9□□□□□ -0.98
SCAF11-208ENST00000546534 TSPAN5P62079 268 aa8.9□□□□□ -0.98
SCAF11-208ENST00000546534 PSG9Q00887 426 aa8.9□□□□□ -0.98
SCAF11-208ENST00000546534 S100A16Q96FQ6 103 aaKnown RBP8.9□□□□□ -0.98
SCAF11-208ENST00000546534 PDCD10Q9BUL8 212 aa8.9□□□□□ -0.98
SCAF11-208ENST00000546534 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
SCAF11-208ENST00000546534 WDR12Q9GZL7 423 aaKnown RBP8.9□□□□□ -0.98
SCAF11-208ENST00000546534 F5H768 121 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 F6UB75 175 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 GSTZ1O43708 216 aaPredicted RBP8.89□□□□□ -0.99
SCAF11-208ENST00000546534 DEFB130BP0DP73 79 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 DEFB130AP0DP74 79 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 ID1P41134 155 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 RORCP51449 518 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 UCP3P55916 312 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 FAM78BQ5VT40 261 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 CNBD2Q96M20 576 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 TP53RKQ96S44 253 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 MAGT1Q9H0U3 335 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 SCPEP1Q9HB40 452 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 KLK11Q9UBX7 282 aa8.89□□□□□ -0.99
SCAF11-208ENST00000546534 A0A0G2JRQ6 117 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 LYRM9A8MSI8 78 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 NXPH3O95157 252 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 PRM2P04554 102 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 RD3LP0DJH9 198 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 SLC25A4P12235 298 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 BTF3P20290 206 aaKnown RBP8.88□□□□□ -0.99
SCAF11-208ENST00000546534 PRSS3P35030 304 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 PSMB3P49720 205 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 SPATA31B1PQ5VZV4 182 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 SSX7Q7RTT5 188 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 COQ8AQ8NI60 647 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 NPIPB3Q92617 1050 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 Q9H8V8 135 aa8.88□□□□□ -0.99
SCAF11-208ENST00000546534 ZNF705GA8MUZ8 300 aaPredicted RBP8.87□□□□□ -0.99
SCAF11-208ENST00000546534 M0QYG6 137 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 SOCS3O14543 225 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 TOMM40O96008 361 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 PI3P19957 117 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 HTR2BP41595 481 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 PAX9P55771 341 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 DLK1P80370 383 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 CLINT1Q14677 625 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 TMEM69Q5SWH9 247 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 EBLN2Q6P2I7 272 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 SPARTQ8N0X7 666 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 LYPD1Q8N2G4 141 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 OR51G1Q8NGK1 321 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
SCAF11-208ENST00000546534 A0A0J9YX75 114 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 LOC100506127A0A0U1RQW1 187 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 ATG12O94817 140 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 PSG1P11464 419 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 PGAM2P15259 253 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 XGP55808 180 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 GABARAPL2P60520 117 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 SPCS3P61009 180 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 RND3P61587 244 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 FCN2Q15485 313 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 C2orf83Q53S99 150 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 TTC32Q5I0X7 151 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 UBE2NLQ5JXB2 153 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 RNASEH2CQ8TDP1 164 aaKnown RBP8.86□□□□□ -0.99
SCAF11-208ENST00000546534 GPX8Q8TED1 209 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 TMEM170AQ8WVE7 144 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 GPR146Q96CH1 333 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 ACY3Q96HD9 319 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 IGF2BP2-AS1Q96M15 143 aa8.86□□□□□ -0.99
SCAF11-208ENST00000546534 HEYLQ9NQ87 328 aaPredicted RBP8.86□□□□□ -0.99
SCAF11-208ENST00000546534 ATP5G1P05496 136 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 ATP5G3P48201 142 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 SP6Q3SY56 376 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 Q5VSD8 79 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 AMTNQ6UX39 209 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 SAMD12Q8N8I0 201 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 FCGR1BQ92637 280 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 RNF125Q96EQ8 232 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 RRNAD1Q96FB5 475 aaKnown RBP8.85□□□□□ -0.99
SCAF11-208ENST00000546534 PBDC1Q9BVG4 233 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 Q9H3A6 140 aa8.85□□□□□ -0.99
SCAF11-208ENST00000546534 C3orf85A0A1B0GTC6 90 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 PLAC8L1A1L4L8 177 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 A8MTW9 85 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 ISLRO14498 428 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 TMEM127O75204 238 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 ELK1P19419 428 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 AZU1P20160 251 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 NUP62P37198 522 aaPredicted RBP8.84□□□□□ -0.99
SCAF11-208ENST00000546534 PIGPP57054 158 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 TRIM16LQ309B1 348 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 AARDQ4LEZ3 155 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 OR4C16Q8NGL9 310 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 UHRF2Q96PU4 802 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 ABHD1Q96SE0 405 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 DOK5Q9P104 306 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 PFDN2Q9UHV9 154 aa8.84□□□□□ -0.99
SCAF11-208ENST00000546534 FLG2Q5D862 2391 aaPredicted RBP8.83□□□□□ -1
SCAF11-208ENST00000546534 CBY3A6NI87 242 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 TSPOP30536 169 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms