RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 TMBIM6P55061 237 aa13.59□□□□□ -0.23
CHPT1-202ENST00000546490 RBMY1FQ15415 496 aaKnown RBP13.59□□□□□ -0.23
CHPT1-202ENST00000546490 LGI3Q8N145 548 aa13.59□□□□□ -0.23
CHPT1-202ENST00000546490 RAB40CQ96S21 281 aa13.59□□□□□ -0.23
CHPT1-202ENST00000546490 C1QTNF4Q9BXJ3 329 aa13.59□□□□□ -0.23
CHPT1-202ENST00000546490 SEPSECSQ9HD40 501 aaKnown RBP13.59□□□□□ -0.23
CHPT1-202ENST00000546490 CLEC5AQ9NY25 188 aa13.59□□□□□ -0.23
CHPT1-202ENST00000546490 X6R8D5 127 aa13.59□□□□□ -0.23
CHPT1-202ENST00000546490 PIGBOS1A0A0B4J2F0 54 aa13.58□□□□□ -0.24
CHPT1-202ENST00000546490 IGLL5B9A064 214 aa13.58□□□□□ -0.24
CHPT1-202ENST00000546490 BUB3O43684 328 aa13.58□□□□□ -0.24
CHPT1-202ENST00000546490 AKR1C4P17516 323 aa13.58□□□□□ -0.24
CHPT1-202ENST00000546490 NUTF2P61970 127 aaKnown RBP13.58□□□□□ -0.24
CHPT1-202ENST00000546490 OR51G1Q8NGK1 321 aa13.58□□□□□ -0.24
CHPT1-202ENST00000546490 RNF125Q96EQ8 232 aa13.58□□□□□ -0.24
CHPT1-202ENST00000546490 RBKSQ9H477 322 aa13.58□□□□□ -0.24
CHPT1-202ENST00000546490 PFDN2Q9UHV9 154 aa13.58□□□□□ -0.24
CHPT1-202ENST00000546490 PSG1P11464 419 aa13.57□□□□□ -0.24
CHPT1-202ENST00000546490 HLA-DMBP28068 263 aa13.57□□□□□ -0.24
CHPT1-202ENST00000546490 SUPT4H1P63272 117 aaKnown RBP13.57□□□□□ -0.24
CHPT1-202ENST00000546490 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
CHPT1-202ENST00000546490 CSNK1G2-AS1Q8NCQ2 148 aa13.57□□□□□ -0.24
CHPT1-202ENST00000546490 HECTD4Q9Y4D8 3996 aa13.56□□□□□ -0.24
CHPT1-202ENST00000546490 TRAV10A0A0B4J240 114 aa13.56□□□□□ -0.24
CHPT1-202ENST00000546490 FAUP35544 74 aaKnown RBP13.56□□□□□ -0.24
CHPT1-202ENST00000546490 ATP5IP56385 69 aaPredicted RBP13.56□□□□□ -0.24
CHPT1-202ENST00000546490 KLF9Q13886 244 aaPredicted RBP13.56□□□□□ -0.24
CHPT1-202ENST00000546490 OR8G2PQ6IF36 304 aa13.56□□□□□ -0.24
CHPT1-202ENST00000546490 Q6ZTC4 211 aa13.56□□□□□ -0.24
CHPT1-202ENST00000546490 OR1S1Q8NH92 325 aa13.56□□□□□ -0.24
CHPT1-202ENST00000546490 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
CHPT1-202ENST00000546490 PBDC1Q9BVG4 233 aa13.56□□□□□ -0.24
CHPT1-202ENST00000546490 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
CHPT1-202ENST00000546490 APLNQ9ULZ1 77 aa13.56□□□□□ -0.24
CHPT1-202ENST00000546490 ELOA3CA0A087WX78 387 aaPredicted RBP13.55□□□□□ -0.24
CHPT1-202ENST00000546490 FABP12A6NFH5 140 aa13.55□□□□□ -0.24
CHPT1-202ENST00000546490 ZFP92A6NM28 416 aa13.55□□□□□ -0.24
CHPT1-202ENST00000546490 DUXBA0A1W2PPF3 345 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 FABP1P07148 127 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 HLA-DRB4P13762 266 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 PRR20EP86478 221 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 PRR20CP86479 221 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 PRR20DP86480 221 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 PRR20BP86481 221 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 PRR20AP86496 221 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 HLA-DRB4X5D2U9 266 aa13.54□□□□□ -0.24
CHPT1-202ENST00000546490 H3BMM0 161 aa13.53□□□□□ -0.24
CHPT1-202ENST00000546490 H3BMQ9 156 aa13.53□□□□□ -0.24
CHPT1-202ENST00000546490 TNFSF8P32971 234 aa13.53□□□□□ -0.24
CHPT1-202ENST00000546490 GPX4P36969 197 aaPredicted RBP13.53□□□□□ -0.24
CHPT1-202ENST00000546490 NKX2-1P43699 371 aaPredicted RBP13.53□□□□□ -0.24
CHPT1-202ENST00000546490 AP3S2P59780 193 aa13.53□□□□□ -0.24
CHPT1-202ENST00000546490 GAMTQ14353 236 aa13.53□□□□□ -0.24
CHPT1-202ENST00000546490 TMED4Q7Z7H5 227 aa13.53□□□□□ -0.24
CHPT1-202ENST00000546490 MCFD2Q8NI22 146 aa13.53□□□□□ -0.24
CHPT1-202ENST00000546490 XCL2Q9UBD3 114 aa13.53□□□□□ -0.24
CHPT1-202ENST00000546490 IGHV4-4A0A075B6R2 117 aa13.52□□□□□ -0.25
CHPT1-202ENST00000546490 LYZP61626 148 aa13.52□□□□□ -0.25
CHPT1-202ENST00000546490 SOSTQ9BQB4 213 aa13.52□□□□□ -0.25
CHPT1-202ENST00000546490 CELA1Q9UNI1 258 aa13.52□□□□□ -0.25
CHPT1-202ENST00000546490 ID1P41134 155 aa13.51□□□□□ -0.25
CHPT1-202ENST00000546490 PSMB3P49720 205 aa13.51□□□□□ -0.25
CHPT1-202ENST00000546490 RAB11AP62491 216 aa13.51□□□□□ -0.25
CHPT1-202ENST00000546490 ZNF90Q03938 601 aa13.51□□□□□ -0.25
CHPT1-202ENST00000546490 TMEM128Q5BJH2 165 aa13.51□□□□□ -0.25
CHPT1-202ENST00000546490 COQ8AQ8NI60 647 aa13.51□□□□□ -0.25
CHPT1-202ENST00000546490 TRIM63Q969Q1 353 aa13.51□□□□□ -0.25
CHPT1-202ENST00000546490 RNF126Q9BV68 326 aa13.51□□□□□ -0.25
CHPT1-202ENST00000546490 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
CHPT1-202ENST00000546490 AMBPP02760 352 aa13.5□□□□□ -0.25
CHPT1-202ENST00000546490 VAMP1P23763 118 aa13.5□□□□□ -0.25
CHPT1-202ENST00000546490 C1orf194Q5T5A4 169 aa13.5□□□□□ -0.25
CHPT1-202ENST00000546490 TOMM5Q8N4H5 51 aa13.5□□□□□ -0.25
CHPT1-202ENST00000546490 PPP1R14BQ96C90 147 aa13.5□□□□□ -0.25
CHPT1-202ENST00000546490 DEFB131BA0A096LNP1 70 aa13.49□□□□□ -0.25
CHPT1-202ENST00000546490 SNRPGP15A8MWD9 76 aa13.49□□□□□ -0.25
CHPT1-202ENST00000546490 PITX3O75364 302 aa13.49□□□□□ -0.25
CHPT1-202ENST00000546490 IAPPP10997 89 aa13.49□□□□□ -0.25
CHPT1-202ENST00000546490 PYDC2Q56P42 97 aa13.49□□□□□ -0.25
CHPT1-202ENST00000546490 FOXI2Q6ZQN5 318 aa13.49□□□□□ -0.25
CHPT1-202ENST00000546490 LINC00052Q96N35 136 aa13.49□□□□□ -0.25
CHPT1-202ENST00000546490 TRGV9Q99603 122 aa13.49□□□□□ -0.25
CHPT1-202ENST00000546490 WDR12Q9GZL7 423 aaKnown RBP13.49□□□□□ -0.25
CHPT1-202ENST00000546490 SAV1Q9H4B6 383 aaPredicted RBP13.49□□□□□ -0.25
CHPT1-202ENST00000546490 PAIP2BQ9ULR5 123 aaKnown RBP13.49□□□□□ -0.25
CHPT1-202ENST00000546490 MED6O75586 246 aa13.48□□□□□ -0.25
CHPT1-202ENST00000546490 SLC25A6P12236 298 aa13.48□□□□□ -0.25
CHPT1-202ENST00000546490 C12orf74Q32Q52 190 aa13.48□□□□□ -0.25
CHPT1-202ENST00000546490 GDF5OSQ5U4N7 250 aa13.48□□□□□ -0.25
CHPT1-202ENST00000546490 SAMD13Q5VXD3 122 aa13.48□□□□□ -0.25
CHPT1-202ENST00000546490 ZNF705AQ6ZN79 300 aaPredicted RBP13.48□□□□□ -0.25
CHPT1-202ENST00000546490 ZNF767PQ75MW2 155 aa13.48□□□□□ -0.25
CHPT1-202ENST00000546490 LRTM2Q8N967 370 aa13.48□□□□□ -0.25
CHPT1-202ENST00000546490 CIB3Q96Q77 187 aaPredicted RBP13.48□□□□□ -0.25
CHPT1-202ENST00000546490 NEU1Q99519 415 aa13.48□□□□□ -0.25
CHPT1-202ENST00000546490 IGKV3-20P01619 116 aa13.47□□□□□ -0.25
CHPT1-202ENST00000546490 RPP30P78346 268 aaKnown RBP13.47□□□□□ -0.25
CHPT1-202ENST00000546490 OR2F1Q13607 317 aa13.47□□□□□ -0.25
CHPT1-202ENST00000546490 OR8I2Q8N0Y5 310 aa13.47□□□□□ -0.25
CHPT1-202ENST00000546490 DEDD2Q8WXF8 326 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms