RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 BHLHA15Q7RTS1 189 aaPredicted RBP11.44□□□□□ -0.58
SRP54-202ENST00000546080 OR1B1Q8NGR6 318 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 FAM222BQ8WU58 562 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 GAFA1Q96PS6 74 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 ZNF835Q9Y2P0 537 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 TIMM8BQ9Y5J9 83 aaPredicted RBP11.44□□□□□ -0.58
SRP54-202ENST00000546080 GAGE12BA1L429 117 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 K7ERU9 68 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 LTAP01374 205 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 SP9P0CG40 484 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 ZNF138P52744 262 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 WT1-ASQ06250 92 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 VHLLQ6RSH7 139 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 ZNF833PQ6ZTB9 187 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 C5orf17Q8NAS9 161 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 CCL13Q99616 98 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 RNF7Q9UBF6 113 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 TTC28Q96AY4 2481 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 TM4SF5O14894 197 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 IGHG3P01860 377 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 NBEAP1P0C6P0 100 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 ARF6P62330 175 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 FAM71F2Q6NXP2 309 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 PMCHL2Q9BQD1 86 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 LINC00574Q9H8X3 128 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 MRPL36Q9P0J6 103 aaKnown RBP11.43□□□□□ -0.58
SRP54-202ENST00000546080 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 C10orf55Q5SWW7 151 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 FLYWCH2Q96CP2 140 aaKnown RBP11.43□□□□□ -0.58
SRP54-202ENST00000546080 TMUB1Q9BVT8 246 aa11.43□□□□□ -0.58
SRP54-202ENST00000546080 TANC2Q9HCD6 1990 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.42□□□□□ -0.58
SRP54-202ENST00000546080 M0R1B8 84 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 CSN3P07498 182 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 HTR1DP28221 377 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 LINC01545Q5VT33 79 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 LHFPL4Q7Z7J7 247 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 BPIFA4PQ86YQ2 179 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 UBALD2Q8IYN6 164 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 VSTM2AQ8TAG5 236 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 TMEM167AQ8TBQ9 72 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 ZNF71Q9NQZ8 489 aaPredicted RBP11.42□□□□□ -0.58
SRP54-202ENST00000546080 PLSCR4Q9NRQ2 329 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 SLC25A15Q9Y619 301 aa11.42□□□□□ -0.58
SRP54-202ENST00000546080 C7orf71A4D174 169 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 FAM231BA6NCW3 169 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 CGB1A6NKQ9 187 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 PRR33A8MZF0 331 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 TCRAP04437 139 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 COX8AP10176 69 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 COL8A1P27658 744 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 ZCCHC24Q8N2G6 241 aaKnown RBP11.41□□□□□ -0.58
SRP54-202ENST00000546080 OR4A5Q8NH83 315 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 Q9H3A6 140 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 PROCRQ9UNN8 238 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 DSCAML1Q8TD84 2053 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 hADV38S2A0JD32 116 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 HAX1O00165 279 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 HES3Q5TGS1 186 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
SRP54-202ENST00000546080 H3BTX0 84 aa11.4□□□□□ -0.58
SRP54-202ENST00000546080 GATA4P43694 442 aa11.4□□□□□ -0.58
SRP54-202ENST00000546080 ZNF788Q6ZQV5 615 aa11.4□□□□□ -0.58
SRP54-202ENST00000546080 C2orf91Q6ZV80 131 aa11.4□□□□□ -0.58
SRP54-202ENST00000546080 FAM169BQ8N8A8 192 aa11.4□□□□□ -0.58
SRP54-202ENST00000546080 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
SRP54-202ENST00000546080 TNCP24821 2201 aa11.4□□□□□ -0.58
SRP54-202ENST00000546080 RAI1Q7Z5J4 1906 aaPredicted RBP11.4□□□□□ -0.58
SRP54-202ENST00000546080 NPIPB6E9PJ23 425 aa11.4□□□□□ -0.59
SRP54-202ENST00000546080 IGLC1P0CG04 106 aa11.4□□□□□ -0.59
SRP54-202ENST00000546080 SEC11AP67812 179 aa11.4□□□□□ -0.59
SRP54-202ENST00000546080 TNFAIP6P98066 277 aaPredicted RBP11.4□□□□□ -0.59
SRP54-202ENST00000546080 OR4C13Q8NGP0 309 aa11.4□□□□□ -0.59
SRP54-202ENST00000546080 AP5S1Q9NUS5 200 aa11.4□□□□□ -0.59
SRP54-202ENST00000546080 DKK4Q9UBT3 224 aa11.4□□□□□ -0.59
SRP54-202ENST00000546080 LINC00312Q9Y6C7 94 aa11.4□□□□□ -0.59
SRP54-202ENST00000546080 DSCAMO60469 2012 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 NBEAQ8NFP9 2946 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 GAGE10A6NGK3 116 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 C22orf46C9J442 243 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 SNAI2O43623 268 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
SRP54-202ENST00000546080 GP9P14770 177 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 GLRXP35754 106 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 Q86TA4 180 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 AHCTF1Q8WYP5 2266 aa11.39□□□□□ -0.59
SRP54-202ENST00000546080 PRR14LQ5THK1 2151 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 PPIAL4DF5H284 164 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 FAM87AP0C7U9 286 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 TMEM97Q5BJF2 176 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 CIARTQ8N365 385 aaPredicted RBP11.38□□□□□ -0.59
SRP54-202ENST00000546080 OR10X1Q8NGY0 326 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 NEU4Q8WWR8 484 aaPredicted RBP11.38□□□□□ -0.59
SRP54-202ENST00000546080 SARAFQ96BY9 339 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 WDFY4Q6ZS81 3184 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 FA2HQ7L5A8 372 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 AP1S3Q96PC3 154 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 TRGV9Q99603 122 aa11.38□□□□□ -0.59
SRP54-202ENST00000546080 MEGF9Q9H1U4 602 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms