RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 MRPL36Q9P0J6 103 aaKnown RBP13.24□□□□□ -0.29
CD9-211ENST00000546073 MLXQ9UH92 298 aa13.24□□□□□ -0.29
CD9-211ENST00000546073 PSG1P11464 419 aa13.23□□□□□ -0.29
CD9-211ENST00000546073 PAX9P55771 341 aa13.23□□□□□ -0.29
CD9-211ENST00000546073 CD81P60033 236 aa13.23□□□□□ -0.29
CD9-211ENST00000546073 LYRM2Q9NU23 88 aaPredicted RBP13.23□□□□□ -0.29
CD9-211ENST00000546073 RNF24Q9Y225 148 aa13.23□□□□□ -0.29
CD9-211ENST00000546073 IGHV3-49A0A0A0MS15 119 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 HELTA6NFD8 242 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 K7EIL1 84 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 CHEK1O14757 476 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 DEDDO75618 318 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 SULT1A1P50225 295 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 LYZP61626 148 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 SELENOTP62341 195 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 ATP6V1FQ16864 119 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 TEPPQ6URK8 271 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 TMEM61Q8N0U2 210 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 THAP6Q8TBB0 222 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
CD9-211ENST00000546073 WDR89Q96FK6 387 aaPredicted RBP13.22□□□□□ -0.29
CD9-211ENST00000546073 FAM24AA6NFZ4 105 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 TSPAN4O14817 238 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 P2RY1P47900 373 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 FGL1Q08830 312 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 SLC38A11Q08AI6 406 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 OR2F1Q13607 317 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 ADAMTSL5Q6ZMM2 481 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 TCF24Q7RTU0 167 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 TMEM217Q8N7C4 229 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 THAP8Q8NA92 274 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 PPP1R1CQ8WVI7 109 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 ASB13Q8WXK3 278 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 NEURL2Q9BR09 285 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 ZFAND3Q9H8U3 227 aa13.21□□□□□ -0.29
CD9-211ENST00000546073 IGHV3OR16-13A0A075B7E8 117 aa13.2□□□□□ -0.3
CD9-211ENST00000546073 IGHV3-74A0A0B4J1X5 117 aa13.2□□□□□ -0.3
CD9-211ENST00000546073 CST7O76096 145 aa13.2□□□□□ -0.3
CD9-211ENST00000546073 CRYBB3P26998 211 aa13.2□□□□□ -0.3
CD9-211ENST00000546073 RAP2BP61225 183 aa13.2□□□□□ -0.3
CD9-211ENST00000546073 TMEM147Q9BVK8 224 aa13.2□□□□□ -0.3
CD9-211ENST00000546073 UQCC1Q9NVA1 299 aa13.2□□□□□ -0.3
CD9-211ENST00000546073 FBXL17Q9UF56 701 aa13.2□□□□□ -0.3
CD9-211ENST00000546073 IGKV3-7A0A075B6H7 116 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 EDN2P20800 178 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 ZNF90Q03938 601 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 IL15RAQ13261 267 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 CYP2G1PQ6ZSU1 146 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 ZNF546Q86UE3 836 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 TMEM252Q8N6L7 170 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 RNF2Q99496 336 aa13.19□□□□□ -0.3
CD9-211ENST00000546073 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 ZNF785A8K8V0 405 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 PRSS46E5RG02 174 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 ORM2P19652 201 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 H2BFSP57053 126 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 BAXQ07812 192 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 ST8SIA2Q92186 375 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 VSIRQ9H7M9 311 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 NOTCH1P46531 2555 aa13.18□□□□□ -0.3
CD9-211ENST00000546073 OR11H12B2RN74 326 aa13.17□□□□□ -0.3
CD9-211ENST00000546073 MPC2O95563 127 aa13.17□□□□□ -0.3
CD9-211ENST00000546073 TFPI2P48307 235 aa13.17□□□□□ -0.3
CD9-211ENST00000546073 OXA1LQ15070 435 aa13.17□□□□□ -0.3
CD9-211ENST00000546073 PXDC1Q5TGL8 231 aa13.17□□□□□ -0.3
CD9-211ENST00000546073 Q6ZRG5 221 aa13.17□□□□□ -0.3
CD9-211ENST00000546073 OR1B1Q8NGR6 318 aa13.17□□□□□ -0.3
CD9-211ENST00000546073 SLC45A2Q9UMX9 530 aa13.17□□□□□ -0.3
CD9-211ENST00000546073 PMS2P5A8MQ11 134 aa13.16□□□□□ -0.3
CD9-211ENST00000546073 DFFBO76075 338 aa13.16□□□□□ -0.3
CD9-211ENST00000546073 WFDC3Q8IUB2 231 aa13.16□□□□□ -0.3
CD9-211ENST00000546073 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
CD9-211ENST00000546073 ZNF709Q8N972 641 aa13.16□□□□□ -0.3
CD9-211ENST00000546073 STXBP6Q8NFX7 210 aa13.16□□□□□ -0.3
CD9-211ENST00000546073 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
CD9-211ENST00000546073 IGKV1D-37A0A075B6S9 117 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 TRAV2A0A0B4J234 112 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 MPDU1O75352 247 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 HYPMO75409 117 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 CCNKO75909 580 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 OR5G3P0C626 314 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 NHLRC4P0CG21 123 aaPredicted RBP13.15□□□□□ -0.3
CD9-211ENST00000546073 IGHV4-30-4P0DP06 118 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 FCN2Q15485 313 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
CD9-211ENST00000546073 C1orf194Q5T5A4 169 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 STPG3Q8N7X2 389 aa13.15□□□□□ -0.3
CD9-211ENST00000546073 IGSF23A1L1A6 192 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 IFNA5P01569 189 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
CD9-211ENST00000546073 LINC00869P0C866 280 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 GALR1P47211 349 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 CAMLGP49069 296 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 EWSR1Q01844 656 aaKnown RBP eCLIP13.14□□□□□ -0.31
CD9-211ENST00000546073 SAMD13Q5VXD3 122 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 SIGLEC15Q6ZMC9 328 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms