RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 S100A5P33763 92 aa16.55■□□□□ 0.24
CHD4-214ENST00000545942 GPX4P36969 197 aaPredicted RBP16.55■□□□□ 0.24
CHD4-214ENST00000545942 SNRPD3P62318 126 aaKnown RBP16.55■□□□□ 0.24
CHD4-214ENST00000545942 SIGLEC15Q6ZMC9 328 aa16.55■□□□□ 0.24
CHD4-214ENST00000545942 OR51G1Q8NGK1 321 aa16.55■□□□□ 0.24
CHD4-214ENST00000545942 DEDD2Q8WXF8 326 aa16.55■□□□□ 0.24
CHD4-214ENST00000545942 RNF125Q96EQ8 232 aa16.55■□□□□ 0.24
CHD4-214ENST00000545942 NRN1Q9NPD7 142 aa16.55■□□□□ 0.24
CHD4-214ENST00000545942 CCDC160A6NGH7 325 aa16.54■□□□□ 0.24
CHD4-214ENST00000545942 C4BPBP20851 252 aa16.54■□□□□ 0.24
CHD4-214ENST00000545942 VAMP1P23763 118 aa16.54■□□□□ 0.24
CHD4-214ENST00000545942 Q8NAQ8 132 aa16.54■□□□□ 0.24
CHD4-214ENST00000545942 RAB40CQ96S21 281 aa16.54■□□□□ 0.24
CHD4-214ENST00000545942 SLC25A21Q9BQT8 299 aaPredicted RBP16.54■□□□□ 0.24
CHD4-214ENST00000545942 ZFP92A6NM28 416 aa16.53■□□□□ 0.24
CHD4-214ENST00000545942 FAM90A26D6RGX4 464 aa16.53■□□□□ 0.24
CHD4-214ENST00000545942 PITX3O75364 302 aa16.53■□□□□ 0.24
CHD4-214ENST00000545942 NUP62P37198 522 aaPredicted RBP16.53■□□□□ 0.24
CHD4-214ENST00000545942 GAMTQ14353 236 aa16.53■□□□□ 0.24
CHD4-214ENST00000545942 ZNF79Q15937 498 aa16.53■□□□□ 0.24
CHD4-214ENST00000545942 LRTM2Q8N967 370 aa16.53■□□□□ 0.24
CHD4-214ENST00000545942 SLC35E1Q96K37 410 aa16.53■□□□□ 0.24
CHD4-214ENST00000545942 SEPSECSQ9HD40 501 aaKnown RBP16.53■□□□□ 0.24
CHD4-214ENST00000545942 PFDN2Q9UHV9 154 aa16.53■□□□□ 0.24
CHD4-214ENST00000545942 SLC25A6P12236 298 aa16.52■□□□□ 0.24
CHD4-214ENST00000545942 MIFP14174 115 aa16.52■□□□□ 0.24
CHD4-214ENST00000545942 OR8G2PQ6IF36 304 aa16.52■□□□□ 0.24
CHD4-214ENST00000545942 PBDC1Q9BVG4 233 aa16.52■□□□□ 0.24
CHD4-214ENST00000545942 ZNF705EA8MWA4 302 aaPredicted RBP16.51■□□□□ 0.23
CHD4-214ENST00000545942 RAB11AP62491 216 aa16.51■□□□□ 0.23
CHD4-214ENST00000545942 CCDC190Q86UF4 302 aa16.51■□□□□ 0.23
CHD4-214ENST00000545942 HRH4Q9H3N8 390 aa16.51■□□□□ 0.23
CHD4-214ENST00000545942 IGKV1D-37A0A075B6S9 117 aa16.5■□□□□ 0.23
CHD4-214ENST00000545942 IGHV4-28A0A0C4DH34 117 aa16.5■□□□□ 0.23
CHD4-214ENST00000545942 FABP1P07148 127 aa16.5■□□□□ 0.23
CHD4-214ENST00000545942 IAPPP10997 89 aa16.5■□□□□ 0.23
CHD4-214ENST00000545942 NUTF2P61970 127 aaKnown RBP16.5■□□□□ 0.23
CHD4-214ENST00000545942 ZNF90Q03938 601 aa16.5■□□□□ 0.23
CHD4-214ENST00000545942 LGALS9CQ6DKI2 356 aa16.5■□□□□ 0.23
CHD4-214ENST00000545942 TMED3Q9Y3Q3 217 aa16.5■□□□□ 0.23
CHD4-214ENST00000545942 MED6O75586 246 aa16.49■□□□□ 0.23
CHD4-214ENST00000545942 SFT2D2O95562 160 aa16.49■□□□□ 0.23
CHD4-214ENST00000545942 RBMY1A1P0DJD3 496 aaKnown RBP16.49■□□□□ 0.23
CHD4-214ENST00000545942 RBMY1CP0DJD4 496 aa16.49■□□□□ 0.23
CHD4-214ENST00000545942 RBMY1FQ15415 496 aaKnown RBP16.49■□□□□ 0.23
CHD4-214ENST00000545942 CSNK1G2-AS1Q8NCQ2 148 aa16.49■□□□□ 0.23
CHD4-214ENST00000545942 C2CD4CQ8TF44 421 aa16.49■□□□□ 0.23
CHD4-214ENST00000545942 CLEC5AQ9NY25 188 aa16.49■□□□□ 0.23
CHD4-214ENST00000545942 X6R8D5 127 aa16.49■□□□□ 0.23
CHD4-214ENST00000545942 SNRPGP15A8MWD9 76 aa16.48■□□□□ 0.23
CHD4-214ENST00000545942 PPP1R1AQ13522 171 aa16.48■□□□□ 0.23
CHD4-214ENST00000545942 CENPSQ8N2Z9 138 aa16.48■□□□□ 0.23
CHD4-214ENST00000545942 CIB3Q96Q77 187 aaPredicted RBP16.48■□□□□ 0.23
CHD4-214ENST00000545942 TBC1D24Q9ULP9 559 aa16.48■□□□□ 0.23
CHD4-214ENST00000545942 PAIP2BQ9ULR5 123 aaKnown RBP16.48■□□□□ 0.23
CHD4-214ENST00000545942 C11orf94C9JXX5 98 aa16.47■□□□□ 0.23
CHD4-214ENST00000545942 LYZP61626 148 aa16.47■□□□□ 0.23
CHD4-214ENST00000545942 TRGV9Q99603 122 aa16.47■□□□□ 0.23
CHD4-214ENST00000545942 C1QTNF4Q9BXJ3 329 aa16.47■□□□□ 0.23
CHD4-214ENST00000545942 RBM38Q9H0Z9 239 aaKnown RBP16.47■□□□□ 0.23
CHD4-214ENST00000545942 AGRNO00468 2067 aa16.47■□□□□ 0.23
CHD4-214ENST00000545942 H3BMM0 161 aa16.46■□□□□ 0.23
CHD4-214ENST00000545942 NKX2-1P43699 371 aaPredicted RBP16.46■□□□□ 0.23
CHD4-214ENST00000545942 TCTAP57738 103 aa16.46■□□□□ 0.23
CHD4-214ENST00000545942 RPP30P78346 268 aaKnown RBP16.46■□□□□ 0.23
CHD4-214ENST00000545942 SPANXN2Q5MJ10 180 aa16.46■□□□□ 0.23
CHD4-214ENST00000545942 C1orf194Q5T5A4 169 aa16.46■□□□□ 0.23
CHD4-214ENST00000545942 SYNGR2O43760 224 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 HOXB5P09067 269 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 OR2F1Q13607 317 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 RPP25LQ8N5L8 163 aaKnown RBP16.45■□□□□ 0.22
CHD4-214ENST00000545942 MAGT1Q9H0U3 335 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 ZNF701M0R085 212 aaPredicted RBP16.45■□□□□ 0.22
CHD4-214ENST00000545942 HLA-DRB4P13762 266 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 UBE2MP61081 183 aaKnown RBP16.45■□□□□ 0.22
CHD4-214ENST00000545942 THAP8Q8NA92 274 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 PPP1R14BQ96C90 147 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 SRRQ9GZT4 340 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 XCL2Q9UBD3 114 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 HLA-DRB4X5D2U9 266 aa16.45■□□□□ 0.22
CHD4-214ENST00000545942 IGKV1OR2-108A0A075B7D4 117 aa16.44■□□□□ 0.22
CHD4-214ENST00000545942 WRBO00258 174 aa16.44■□□□□ 0.22
CHD4-214ENST00000545942 DEDDO75618 318 aa16.44■□□□□ 0.22
CHD4-214ENST00000545942 HLA-DMBP28068 263 aa16.44■□□□□ 0.22
CHD4-214ENST00000545942 ID1P41134 155 aa16.44■□□□□ 0.22
CHD4-214ENST00000545942 GGNBP1Q5YKI7 109 aa16.44■□□□□ 0.22
CHD4-214ENST00000545942 WDR12Q9GZL7 423 aaKnown RBP16.44■□□□□ 0.22
CHD4-214ENST00000545942 KMT2AQ03164 3969 aa16.43■□□□□ 0.22
CHD4-214ENST00000545942 ELOA3CA0A087WX78 387 aaPredicted RBP16.43■□□□□ 0.22
CHD4-214ENST00000545942 IGLL5B9A064 214 aa16.43■□□□□ 0.22
CHD4-214ENST00000545942 PRSS46E5RG02 174 aa16.43■□□□□ 0.22
CHD4-214ENST00000545942 CFDP00746 253 aaPredicted RBP16.43■□□□□ 0.22
CHD4-214ENST00000545942 INPP1P49441 399 aa16.43■□□□□ 0.22
CHD4-214ENST00000545942 PSMB3P49720 205 aa16.43■□□□□ 0.22
CHD4-214ENST00000545942 OR8I2Q8N0Y5 310 aa16.42■□□□□ 0.22
CHD4-214ENST00000545942 COQ8AQ8NI60 647 aa16.42■□□□□ 0.22
CHD4-214ENST00000545942 LINC00052Q96N35 136 aa16.42■□□□□ 0.22
CHD4-214ENST00000545942 NAP1L6A6NFF2 107 aa16.41■□□□□ 0.22
CHD4-214ENST00000545942 SOCS3O14543 225 aa16.41■□□□□ 0.22
CHD4-214ENST00000545942 SPANXN5Q5MJ07 72 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms