RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SPATA45Q537H7 98 aa12.69□□□□□ -0.38
LDLR-204ENST00000545707 LRRC10Q5BKY1 277 aa12.69□□□□□ -0.38
LDLR-204ENST00000545707 TMEM186Q96B77 213 aa12.69□□□□□ -0.38
LDLR-204ENST00000545707 TNFRSF19Q9NS68 423 aa12.69□□□□□ -0.38
LDLR-204ENST00000545707 HIGD1CA8MV81 97 aa12.68□□□□□ -0.38
LDLR-204ENST00000545707 TNXAQ16473 311 aa12.68□□□□□ -0.38
LDLR-204ENST00000545707 LINC00322Q6ZN03 302 aaPredicted RBP12.68□□□□□ -0.38
LDLR-204ENST00000545707 FAM87AP0C7U9 286 aa12.68□□□□□ -0.38
LDLR-204ENST00000545707 TCF24Q7RTU0 167 aa12.68□□□□□ -0.38
LDLR-204ENST00000545707 IGLC7A0M8Q6 106 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 INS-IGF2F8WCM5 200 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 RPLP1P05386 114 aaKnown RBP12.67□□□□□ -0.38
LDLR-204ENST00000545707 UBE2G1P62253 170 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 GRAMD2BQ96HH9 432 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 TNFRSF13BO14836 293 aaPredicted RBP12.67□□□□□ -0.38
LDLR-204ENST00000545707 LYNX1P0DP58 116 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 DLX6P56179 175 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 VMA21Q3ZAQ7 101 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 COX19Q49B96 90 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 PRSS33Q8NF86 280 aa12.67□□□□□ -0.38
LDLR-204ENST00000545707 TOX4O94842 621 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 MYCNOSP40205 109 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 CTRLP40313 264 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 MMDQ15546 238 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 IGF2-ASQ6U949 168 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 C11orf42Q8N5U0 333 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 OR4A5Q8NH83 315 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 TMEM208Q9BTX3 173 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 C7orf69Q9H7B7 122 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 PRRG2O14669 202 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 NBEAP1P0C6P0 100 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 IGHV1-8P0DP01 117 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 PRRX1P54821 245 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 FAM231DQ6ZW35 169 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
LDLR-204ENST00000545707 OR4B1Q8NGF8 309 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 RNASE6Q93091 150 aaKnown RBP12.66□□□□□ -0.38
LDLR-204ENST00000545707 CLEC7AQ9BXN2 247 aa12.66□□□□□ -0.38
LDLR-204ENST00000545707 OR2D3Q8NGH3 330 aa12.65□□□□□ -0.38
LDLR-204ENST00000545707 CEP295Q9C0D2 2601 aa12.65□□□□□ -0.38
LDLR-204ENST00000545707 SVEP1Q4LDE5 3571 aa12.65□□□□□ -0.39
LDLR-204ENST00000545707 M0QZ24 198 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 M0QZK8 103 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 TMEM155Q4W5P6 130 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 LINC00311Q8N616 119 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 BORCS7Q96B45 105 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 PERPQ96FX8 193 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 ABHD17AQ96GS6 310 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 LPAR2Q9HBW0 351 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 DYNLRB1Q9NP97 96 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 MALRD1Q5VYJ5 2156 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 NPSP0C0P6 89 aa12.64□□□□□ -0.39
LDLR-204ENST00000545707 RNASEKQ6P5S7 137 aaKnown RBP12.64□□□□□ -0.39
LDLR-204ENST00000545707 SH2D7A6NKC9 451 aaPredicted RBP12.63□□□□□ -0.39
LDLR-204ENST00000545707 HSBP1O75506 76 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 FOXA3P55318 350 aaPredicted RBP12.63□□□□□ -0.39
LDLR-204ENST00000545707 PMCHL1Q16048 86 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 KIR3DL3Q8N743 410 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 WIPF2Q8TF74 440 aaPredicted RBP12.63□□□□□ -0.39
LDLR-204ENST00000545707 ALKBH7Q9BT30 221 aaPredicted RBP12.63□□□□□ -0.39
LDLR-204ENST00000545707 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 E7EQL1 145 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 HIST1H1EP10412 219 aaKnown RBP12.63□□□□□ -0.39
LDLR-204ENST00000545707 RPL27AP46776 148 aaKnown RBP12.63□□□□□ -0.39
LDLR-204ENST00000545707 EBLN2Q6P2I7 272 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 ZNF596Q8TC21 504 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 IGFBPL1Q8WX77 278 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 ASCL2Q99929 193 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 TMEM133Q9H2Q1 129 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 ZNF835Q9Y2P0 537 aa12.63□□□□□ -0.39
LDLR-204ENST00000545707 M0R2Z0 102 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 HYPMO75409 117 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 CRYGCP07315 174 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 MC5RP33032 325 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 PRR30Q53SZ7 412 aaPredicted RBP12.62□□□□□ -0.39
LDLR-204ENST00000545707 Q56UQ5 140 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 GFRALQ6UXV0 394 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 GTSF1Q8WW33 167 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 GPR82Q96P67 336 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 TXN2Q99757 166 aa12.62□□□□□ -0.39
LDLR-204ENST00000545707 LGALS7P47929 136 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 ZNF137PP52743 207 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 FAM71F2Q6NXP2 309 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 Q6ZN92 141 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 CLEC5AQ9NY25 188 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 PTPRZ1P23471 2315 aaPredicted RBP12.61□□□□□ -0.39
LDLR-204ENST00000545707 ZNF318Q5VUA4 2279 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 SHISA9B4DS77 424 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 DLEU1O43261 78 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 GP9P14770 177 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 COX7A1P24310 79 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 LYZP61626 148 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 URB1-AS1Q96HZ7 61 aa12.61□□□□□ -0.39
LDLR-204ENST00000545707 MLST8Q9BVC4 326 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms