RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.69□□□□□ -0.7
SCARB1-209ENST00000545305 TGOLN2O43493 480 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 IGHV3-11P01762 117 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 OR5G3P0C626 314 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 PSG1P11464 419 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 LYZP61626 148 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 RELQ04864 619 aaPredicted RBP10.69□□□□□ -0.7
SCARB1-209ENST00000545305 GCSAMLQ5JQS6 135 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 C10orf99Q6UWK7 81 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 ZNF600Q6ZNG1 722 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 LCNL1Q6ZST4 164 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 OR1B1Q8NGR6 318 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 OR4F5Q8NH21 305 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 GATAD1Q8WUU5 269 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 MRPL32Q9BYC8 188 aaKnown RBP10.69□□□□□ -0.7
SCARB1-209ENST00000545305 HRH4Q9H3N8 390 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 DOK5Q9P104 306 aa10.69□□□□□ -0.7
SCARB1-209ENST00000545305 ELOA3CA0A087WX78 387 aaPredicted RBP10.68□□□□□ -0.7
SCARB1-209ENST00000545305 MAP1LC3B2A6NCE7 125 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 SEC14L6B5MCN3 397 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 HYPMO75409 117 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 RPLP1P05386 114 aaKnown RBP10.68□□□□□ -0.7
SCARB1-209ENST00000545305 CTSGP08311 255 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 ORM2P19652 201 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 ARL3P36405 182 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 C10orf113Q5VZT2 155 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 ZNF343Q6P1L6 599 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 S100A7AQ86SG5 101 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 RPP25LQ8N5L8 163 aaKnown RBP10.68□□□□□ -0.7
SCARB1-209ENST00000545305 RNF152Q8N8N0 203 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 OR5AU1Q8NGC0 362 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 SFT2D1Q8WV19 159 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 RAB24Q969Q5 203 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 CHRDL1Q9BU40 450 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 PBDC1Q9BVG4 233 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 MAP1LC3BQ9GZQ8 125 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 DNAJC4Q9NNZ3 241 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 FUT9Q9Y231 359 aa10.68□□□□□ -0.7
SCARB1-209ENST00000545305 FN1P02751 2386 aaKnown RBP10.68□□□□□ -0.7
SCARB1-209ENST00000545305 A0A1B0GV50 99 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 LINC00862A6NCI5 91 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 IL4P05112 153 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 S100A7P31151 101 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 TAS2R45P59539 299 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 PLP1P60201 277 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 ZNF726P1Q15940 193 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 FAM78BQ5VT40 261 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 LCN15Q6UWW0 184 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 MYOZ3Q8TDC0 251 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 MBD3L1Q8WWY6 194 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 RNF125Q96EQ8 232 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 HIGD1AQ9Y241 93 aa10.67□□□□□ -0.7
SCARB1-209ENST00000545305 TRAV1-1A0A0B4J248 108 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 ANKRD34BA5PLL1 514 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 NUDT19A8MXV4 375 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 PPP5D1E7EU14 171 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 BMPR1BO00238 502 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 OR2C1O95371 312 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 ADMP35318 185 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 KHDC1LQ5JSQ8 128 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 COMMD7Q86VX2 200 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 LINC01006Q8NI28 216 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 MED9Q9NWA0 146 aa10.66□□□□□ -0.7
SCARB1-209ENST00000545305 PEF1Q9UBV8 284 aaKnown RBP10.66□□□□□ -0.7
SCARB1-209ENST00000545305 PUS1Q9Y606 427 aaKnown RBP eCLIP10.66□□□□□ -0.7
SCARB1-209ENST00000545305 WI2-2373I1.2A0A1W2PRP0 233 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 LGALS1P09382 135 aaKnown RBP10.65□□□□□ -0.7
SCARB1-209ENST00000545305 KHDC3LQ587J8 217 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 SPATA31B1PQ5VZV4 182 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 IL34Q6ZMJ4 242 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 MIR17HGQ75NE6 70 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 SSX7Q7RTT5 188 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 IQCF2Q8IXL9 164 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 LYPD6BQ8NI32 183 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 TMEM37Q8WXS4 190 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 OR5B12Q96R08 314 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 TECRQ9NZ01 308 aaKnown RBP10.65□□□□□ -0.7
SCARB1-209ENST00000545305 RNF114Q9Y508 228 aa10.65□□□□□ -0.7
SCARB1-209ENST00000545305 ZFHX3Q15911 3703 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 IGHV3-35A0A0C4DH35 117 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 CLPSL1A2RUU4 121 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 HMGB3O15347 200 aaKnown RBP10.64□□□□□ -0.71
SCARB1-209ENST00000545305 GGCTO75223 188 aaKnown RBP10.64□□□□□ -0.71
SCARB1-209ENST00000545305 CXorf1O96002 111 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 C8orf88P0DMB2 117 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 FGF8P55075 233 aaPredicted RBP10.64□□□□□ -0.71
SCARB1-209ENST00000545305 KIAA0141Q14154 515 aaPredicted RBP10.64□□□□□ -0.71
SCARB1-209ENST00000545305 PATE2Q6UY27 113 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
SCARB1-209ENST00000545305 RABAC1Q9UI14 185 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 RNF24Q9Y225 148 aa10.64□□□□□ -0.71
SCARB1-209ENST00000545305 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 HAX1O00165 279 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 NDUFA4O00483 81 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 EIF3GO75821 320 aaKnown RBP eCLIP10.63□□□□□ -0.71
SCARB1-209ENST00000545305 IFNA1P01562 189 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms