RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SNRPGP15A8MWD9 76 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 H3BP45 60 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 SSSCA1O60232 199 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 SCGB1D2O95969 90 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 NUP62P37198 522 aaPredicted RBP11.67□□□□□ -0.54
CCDC78-216ENST00000544996 ASAH1Q13510 395 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 USF2Q15853 346 aaPredicted RBP11.67□□□□□ -0.54
CCDC78-216ENST00000544996 APRG1Q8IVJ8 170 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 STXBP6Q8NFX7 210 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 MUC7Q8TAX7 377 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 ZNF431Q8TF32 576 aaPredicted RBP11.67□□□□□ -0.54
CCDC78-216ENST00000544996 SMIM8Q96KF7 97 aa11.67□□□□□ -0.54
CCDC78-216ENST00000544996 KIR2DL5BA0A0G2JN68 375 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 KIR2DL5BA0A0G2JPC4 375 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 UBE2CO00762 179 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 UPK1BO75841 260 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 ZNF90Q03938 601 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 C16orf54Q6UWD8 224 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 KIR2DL5AQ8N109 375 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 STPG3Q8N7X2 389 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 ZBTB8BQ8NAP8 495 aaPredicted RBP11.66□□□□□ -0.54
CCDC78-216ENST00000544996 KIR2DL5BQ8NHK3 375 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 ENKURQ8TC29 256 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 RAB40CQ96S21 281 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 TRGV9Q99603 122 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 PBDC1Q9BVG4 233 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 TBC1D24Q9ULP9 559 aa11.66□□□□□ -0.54
CCDC78-216ENST00000544996 HUWE1Q7Z6Z7 4374 aaKnown RBP11.66□□□□□ -0.54
CCDC78-216ENST00000544996 IGKV1D-37A0A075B6S9 117 aa11.65□□□□□ -0.54
CCDC78-216ENST00000544996 FAM25EA8MYX2 175 aa11.65□□□□□ -0.54
CCDC78-216ENST00000544996 PRSS46E5RG02 174 aa11.65□□□□□ -0.54
CCDC78-216ENST00000544996 RPL35AP18077 110 aaKnown RBP11.65□□□□□ -0.54
CCDC78-216ENST00000544996 AKR1C1Q04828 323 aa11.65□□□□□ -0.54
CCDC78-216ENST00000544996 OR8G2PQ6IF36 304 aa11.65□□□□□ -0.54
CCDC78-216ENST00000544996 C12orf45Q8N5I9 185 aaPredicted RBP11.65□□□□□ -0.54
CCDC78-216ENST00000544996 SEC22CQ9BRL7 303 aa11.65□□□□□ -0.54
CCDC78-216ENST00000544996 EDA2RQ9HAV5 297 aa11.65□□□□□ -0.54
CCDC78-216ENST00000544996 STAB2Q8WWQ8 2551 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 C5orf51A6NDU8 294 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 BUB3O43684 328 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 CFDP00746 253 aaPredicted RBP11.64□□□□□ -0.55
CCDC78-216ENST00000544996 LYL1P12980 280 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 TAS2R30P59541 319 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 DEFB131AP59861 70 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 OR2F1Q13607 317 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 Q6ZWC4 215 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
CCDC78-216ENST00000544996 TENM3Q9P273 2699 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 SMCO3A2RU48 225 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 K7EQG2 157 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 CCSO14618 274 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 LYZP61626 148 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 ZNF124Q15973 351 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 SIGLEC15Q6ZMC9 328 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 ACOT7LQ6ZUV0 252 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 PPP1R14BQ96C90 147 aa11.63□□□□□ -0.55
CCDC78-216ENST00000544996 IGKV1OR2-108A0A075B7D4 117 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 L7N2F9 121 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 SPRY2O43597 315 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 TSC22D2O75157 780 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 MBPP02686 304 aaPredicted RBP11.62□□□□□ -0.55
CCDC78-216ENST00000544996 PAX9P55771 341 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 VAMP2P63027 116 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 LEMD1Q68G75 181 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 BPIFCQ8NFQ6 507 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 OR10P1Q8NGE3 313 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 GPN1Q9HCN4 374 aaPredicted RBP11.62□□□□□ -0.55
CCDC78-216ENST00000544996 TP53TG1Q9Y2A0 90 aa11.62□□□□□ -0.55
CCDC78-216ENST00000544996 RCL1Q9Y2P8 373 aaKnown RBP11.62□□□□□ -0.55
CCDC78-216ENST00000544996 IL5P05113 134 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 METTL15P1P0C7V9 234 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 S100A7P31151 101 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 DEFA1P59665 94 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 DEFA3P59666 94 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 DEFB135Q30KP9 77 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 C1orf194Q5T5A4 169 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 GSG1LQ6UXU4 331 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 TMEM144Q7Z5S9 345 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 STHQ8IWL8 128 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 FAM24BQ8N5W8 94 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 C2orf50Q96LR7 162 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 NRN1Q9NPD7 142 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 FBXL17Q9UF56 701 aa11.61□□□□□ -0.55
CCDC78-216ENST00000544996 C7orf66A4D0T2 115 aa11.6□□□□□ -0.55
CCDC78-216ENST00000544996 PMS2P5A8MQ11 134 aa11.6□□□□□ -0.55
CCDC78-216ENST00000544996 ZNF688P0C7X2 276 aa11.6□□□□□ -0.55
CCDC78-216ENST00000544996 SNRPD3P62318 126 aaKnown RBP11.6□□□□□ -0.55
CCDC78-216ENST00000544996 DLK1P80370 383 aa11.6□□□□□ -0.55
CCDC78-216ENST00000544996 CASC10Q5T4H9 136 aa11.6□□□□□ -0.55
CCDC78-216ENST00000544996 IL17DQ8TAD2 202 aa11.6□□□□□ -0.55
CCDC78-216ENST00000544996 MGAT4CQ9UBM8 478 aa11.6□□□□□ -0.55
CCDC78-216ENST00000544996 LSM5Q9Y4Y9 91 aaKnown RBP11.6□□□□□ -0.55
CCDC78-216ENST00000544996 FNDC10F2Z333 226 aa11.59□□□□□ -0.55
CCDC78-216ENST00000544996 PVALBP20472 110 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms