RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 PRELID3AQ96N28 172 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 FBXL15Q9H469 300 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 RPP21Q9H633 154 aaKnown RBP4.73□□□□□ -1.65
VPS50-220ENST00000544910 A0A1B0GUT8 65 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 VDAC2P45880 294 aaPredicted RBP4.73□□□□□ -1.65
VPS50-220ENST00000544910 GNG5P63218 68 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 VWC2Q2TAL6 325 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 ATP5L2Q7Z4Y8 100 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 Q9H3A6 140 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 TMEM14BQ9NUH8 114 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 KLF2Q9Y5W3 355 aaPredicted RBP4.73□□□□□ -1.65
VPS50-220ENST00000544910 COX11Q9Y6N1 276 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 IGKV1D-33P01593 117 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 IGKV1-33P01594 117 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 NBEAP1P0C6P0 100 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 PAX2Q02962 417 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 GAGE2BQ13066 116 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 GAGE2EQ4V326 116 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 TPTE2P1Q5T6R2 138 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 ZCCHC24Q8N2G6 241 aaKnown RBP4.73□□□□□ -1.65
VPS50-220ENST00000544910 TMEM167AQ8TBQ9 72 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 PRO3102Q9H379 93 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 OTORQ9NRC9 128 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 GAGE2DQ9UEU5 116 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 RABAC1Q9UI14 185 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 TRAV8-2A0A0B4J237 113 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 TRAV5A0A0B4J249 113 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 CD5LO43866 347 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 PYYP10082 97 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 TMEM78Q5T7P6 136 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 ZNF788Q6ZQV5 615 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 ZNF833PQ6ZTB9 187 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 SGK494Q96LW2 274 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 TMUB1Q9BVT8 246 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 TRAV8-6A0A0B4J262 113 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 IGHV1-8P0DP01 117 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 OCIAD2Q56VL3 154 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 IGFL2Q6UWQ7 119 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 Q6ZPA2 131 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 GOLT1AQ6ZVE7 132 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 RNASE6Q93091 150 aaKnown RBP4.73□□□□□ -1.65
VPS50-220ENST00000544910 IGHV2-26A0A0B4J1V2 119 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 NPIPB6E9PJ23 425 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 SYT8Q8NBV8 401 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 TMEM160Q9NX00 188 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 A0A0G2JLM5 398 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 GAGE12BA1L429 117 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 SH2D7A6NKC9 451 aaPredicted RBP4.72□□□□□ -1.65
VPS50-220ENST00000544910 A8MWV9 139 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 RNASE2P10153 161 aaKnown RBP4.72□□□□□ -1.65
VPS50-220ENST00000544910 FOXA3P55318 350 aaPredicted RBP4.72□□□□□ -1.65
VPS50-220ENST00000544910 TEX36Q5VZQ5 186 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 CENPVQ7Z7K6 275 aaPredicted RBP4.72□□□□□ -1.65
VPS50-220ENST00000544910 NEU4Q8WWR8 484 aaPredicted RBP4.72□□□□□ -1.65
VPS50-220ENST00000544910 VKORC1Q9BQB6 163 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 SPANXDQ9BXN6 97 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 CLEC5AQ9NY25 188 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 SMPXQ9UHP9 88 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 EPDR1Q9UM22 224 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 RAXQ9Y2V3 346 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 EREGO14944 169 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 HOXA3O43365 443 aaPredicted RBP4.72□□□□□ -1.65
VPS50-220ENST00000544910 RAB9AP51151 201 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 SPACA3Q8IXA5 215 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 ZNF479Q96JC4 524 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 PRSS2P07478 247 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 TMEM249Q2WGJ8 235 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 DUX4L9Q6RFH8 374 aaPredicted RBP4.72□□□□□ -1.65
VPS50-220ENST00000544910 ORMDL3Q8N138 153 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 RPRMLQ8N4K4 120 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 MRPL27Q9P0M9 148 aaKnown RBP4.72□□□□□ -1.65
VPS50-220ENST00000544910 DPM3Q9P2X0 92 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 ADAMTS20P59510 1910 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 BPTFQ12830 3046 aa4.72□□□□□ -1.65
VPS50-220ENST00000544910 TSPOP30536 169 aa4.71□□□□□ -1.65
VPS50-220ENST00000544910 ID1P41134 155 aa4.71□□□□□ -1.65
VPS50-220ENST00000544910 ZNF134P52741 427 aa4.71□□□□□ -1.65
VPS50-220ENST00000544910 LOXL3P58215 753 aa4.71□□□□□ -1.65
VPS50-220ENST00000544910 UNQ5815/PRO19632Q6UWF5 114 aa4.71□□□□□ -1.65
VPS50-220ENST00000544910 C8orf46Q8TAG6 207 aa4.71□□□□□ -1.65
VPS50-220ENST00000544910 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.65
VPS50-220ENST00000544910 TRAV8-4A0A0B4J246 113 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 FAM181BA6NEQ2 426 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 NBR2O15453 112 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 SNAI2O43623 268 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 DNAL4O96015 105 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 PFN1P07737 140 aaKnown RBP4.71□□□□□ -1.66
VPS50-220ENST00000544910 ARPC1AQ92747 370 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 PCDH15Q96QU1 1955 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 IGLV3-9A0A075B6K5 115 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 CRXO43186 299 aaPredicted RBP4.71□□□□□ -1.66
VPS50-220ENST00000544910 IGKV1-16P04430 117 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 CEACAM8P31997 349 aaPredicted RBP4.71□□□□□ -1.66
VPS50-220ENST00000544910 CFHR2P36980 270 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 PVRIGQ6DKI7 326 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 LYPD2Q6UXB3 125 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 ZNF329Q86UD4 541 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 TRGV9Q99603 122 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 CST9LQ9H4G1 147 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 IGHV1-3A0A0C4DH29 117 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms