RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 HBBP68871 147 aa10.43□□□□□ -0.74
CPSF7-223ENST00000544669 PLGLAQ15195 96 aa10.43□□□□□ -0.74
CPSF7-223ENST00000544669 UNQ6494/PRO21346Q6UXR6 183 aa10.43□□□□□ -0.74
CPSF7-223ENST00000544669 MUC15Q8N387 334 aa10.43□□□□□ -0.74
CPSF7-223ENST00000544669 PRSS22Q9GZN4 317 aa10.43□□□□□ -0.74
CPSF7-223ENST00000544669 SH3BGRL2Q9UJC5 107 aa10.43□□□□□ -0.74
CPSF7-223ENST00000544669 URB1O60287 2271 aaKnown RBP10.43□□□□□ -0.74
CPSF7-223ENST00000544669 OTOGLQ3ZCN5 2332 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
CPSF7-223ENST00000544669 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 UCNP55089 124 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 SSBP2P81877 361 aaPredicted RBP10.42□□□□□ -0.74
CPSF7-223ENST00000544669 ZNF841Q6ZN19 808 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 BPIFA4PQ86YQ2 179 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 SPACA3Q8IXA5 215 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 ARL6IP6Q8N6S5 226 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 PRSS33Q8NF86 280 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 C18orf32Q8TCD1 76 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 SRSF12Q8WXF0 261 aaKnown RBP10.42□□□□□ -0.74
CPSF7-223ENST00000544669 NEU1Q99519 415 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 Q9H3A6 140 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 C7orf69Q9H7B7 122 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 ZFP30Q9Y2G7 519 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 SERTM2A0A1B0GWG4 89 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 M0R1W7 72 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 TCAPO15273 167 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 HTR1DP28221 377 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 RBPMS2Q6ZRY4 209 aaKnown RBP10.42□□□□□ -0.74
CPSF7-223ENST00000544669 LY6G5BQ8NDX9 201 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 OR4F17Q8NGA8 305 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 BLNKQ8WV28 456 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 CHCHD1Q96BP2 118 aaKnown RBP10.42□□□□□ -0.74
CPSF7-223ENST00000544669 UQCR10Q9UDW1 63 aa10.42□□□□□ -0.74
CPSF7-223ENST00000544669 PRR14LQ5THK1 2151 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 A0A1B0GXF2 115 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 OOSP1A8MZH6 123 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 TEX22C9J3V5 150 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 LY6LH3BQJ8 138 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 CNIH1O95406 144 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 MOSP00540 346 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 IGLC1P0CG04 106 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 Q6AWC8 147 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 NHLRC2Q8NBF2 726 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 OR11H6Q8NGC7 330 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 LINC00479Q96M42 142 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 FAM103A1Q9BTL3 118 aaKnown RBP10.41□□□□□ -0.74
CPSF7-223ENST00000544669 SNHG12Q9BXW3 62 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 TPSG1Q9NRR2 321 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 CBLN4Q9NTU7 201 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 DPM3Q9P2X0 92 aa10.41□□□□□ -0.74
CPSF7-223ENST00000544669 C19orf71A6NCJ1 209 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 I3L2K1 104 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 RPLP1P05386 114 aaKnown RBP10.4□□□□□ -0.74
CPSF7-223ENST00000544669 SNRPCP09234 159 aaKnown RBP10.4□□□□□ -0.74
CPSF7-223ENST00000544669 OR5AL1P0C617 328 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 SLC35B1P78383 322 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 PRR27Q6MZM9 219 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 CCDC144NLQ6NUI1 221 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 NEU4Q8WWR8 484 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-223ENST00000544669 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-223ENST00000544669 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-223ENST00000544669 SLC25A39Q9BZJ4 359 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-223ENST00000544669 MRPL36Q9P0J6 103 aaKnown RBP10.4□□□□□ -0.74
CPSF7-223ENST00000544669 FBXL7Q9UJT9 491 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 FRYLO94915 3013 aa10.4□□□□□ -0.74
CPSF7-223ENST00000544669 IGHV3-72A0A0B4J1Y9 119 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 TRAV34A0A0B4J273 112 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 PSG1P11464 419 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.75
CPSF7-223ENST00000544669 SLAQ13239 276 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 KIAA1644Q3SXP7 199 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 ZNF672Q499Z4 452 aaPredicted RBP10.4□□□□□ -0.75
CPSF7-223ENST00000544669 NPBQ8NG41 125 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 FAM168AQ92567 244 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 RITA1Q96K30 269 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 SSBP3Q9BWW4 388 aaPredicted RBP10.4□□□□□ -0.75
CPSF7-223ENST00000544669 WNT10AQ9GZT5 417 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 THYN1Q9P016 225 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 PAM16Q9Y3D7 125 aa10.4□□□□□ -0.75
CPSF7-223ENST00000544669 NPIPB6E9PJ23 425 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 NBR2O15453 112 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 BTF3P20290 206 aaKnown RBP10.39□□□□□ -0.75
CPSF7-223ENST00000544669 GPR6P46095 362 aaPredicted RBP10.39□□□□□ -0.75
CPSF7-223ENST00000544669 LYZP61626 148 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 PDE6HQ13956 83 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 TMEM75Q8N9X5 138 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 NDFIP1Q9BT67 221 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 SHANK2-AS3Q9BTD1 123 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 BDP1A6H8Y1 2624 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 VPS13AQ96RL7 3174 aa10.39□□□□□ -0.75
CPSF7-223ENST00000544669 M0R2Z0 102 aa10.38□□□□□ -0.75
CPSF7-223ENST00000544669 CA1P00915 261 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-223ENST00000544669 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
CPSF7-223ENST00000544669 COL8A1P27658 744 aa10.38□□□□□ -0.75
CPSF7-223ENST00000544669 CDKN1AP38936 164 aa10.38□□□□□ -0.75
CPSF7-223ENST00000544669 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
CPSF7-223ENST00000544669 C1RLQ9NZP8 487 aa10.38□□□□□ -0.75
CPSF7-223ENST00000544669 FREM2Q5SZK8 3169 aa10.38□□□□□ -0.75
CPSF7-223ENST00000544669 CADP27708 2225 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms