RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 RNF2Q99496 336 aa4.2□□□□□ -1.74
CLSTN3-215ENST00000544584 C1QTNF4Q9BXJ3 329 aa4.2□□□□□ -1.74
CLSTN3-215ENST00000544584 CSTL1Q9H114 145 aa4.2□□□□□ -1.74
CLSTN3-215ENST00000544584 MS4A6AQ9H2W1 248 aa4.2□□□□□ -1.74
CLSTN3-215ENST00000544584 GPN1Q9HCN4 374 aaPredicted RBP4.2□□□□□ -1.74
CLSTN3-215ENST00000544584 MGAT4CQ9UBM8 478 aa4.2□□□□□ -1.74
CLSTN3-215ENST00000544584 SLC45A2Q9UMX9 530 aa4.2□□□□□ -1.74
CLSTN3-215ENST00000544584 FRAS1Q86XX4 4008 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 IGKV3-7A0A075B6H7 116 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 IGHV3OR16-8A0A075B7F1 116 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 A0A0G2JRQ6 117 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 LINC00854A0A1B0GVQ3 168 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 SMCO3A2RU48 225 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 C5orf51A6NDU8 294 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 F8W735 103 aaPredicted RBP4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 SPRY2O43597 315 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 JTBO76095 146 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 NXPH3O95157 252 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 IGHV3-48P01763 117 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 IGLC1P0CG04 106 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 SPP1P10451 314 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 IL7P13232 177 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 ATF4P18848 351 aaPredicted RBP4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 TFPI2P48307 235 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 RAP2BP61225 183 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 SUPT4H1P63272 117 aaKnown RBP4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 CYCSP99999 105 aaKnown RBP4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 DHRS2Q13268 280 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 TIGITQ495A1 244 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 SPANXN5Q5MJ07 72 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 PXDC1Q5TGL8 231 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 SPATA31B1PQ5VZV4 182 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 MORN3Q6PF18 240 aaPredicted RBP4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 SIGLEC15Q6ZMC9 328 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 ADAMTSL5Q6ZMM2 481 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 WFDC3Q8IUB2 231 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 OR10P1Q8NGE3 313 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 ENKURQ8TC29 256 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 ST8SIA2Q92186 375 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 TRGV9Q99603 122 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 PBDC1Q9BVG4 233 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 GGACTQ9BVM4 153 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 FNDC4Q9H6D8 234 aaPredicted RBP4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 PSENENQ9NZ42 101 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 UBQLN2Q9UHD9 624 aa4.19□□□□□ -1.74
CLSTN3-215ENST00000544584 RBMY1BA6NDE4 496 aaKnown RBP4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 RBMY1EA6NEQ0 496 aaKnown RBP4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 FAM25EA8MYX2 175 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 FNDC10F2Z333 226 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 SSSCA1O60232 199 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 PRAF2O60831 178 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 PITX3O75364 302 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 IGKV1-17P01599 117 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 TCRBP04435 133 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 RBMY1DP0C7P1 496 aaKnown RBP4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 PET100P0DJ07 73 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 IAPPP10997 89 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 LYZP61626 148 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 HBG1P69891 147 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 HBG2P69892 147 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 GAMTQ14353 236 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 BAK1Q16611 211 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 IAH1Q2TAA2 248 aaPredicted RBP4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 EBLN2Q6P2I7 272 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 GSG1LQ6UXU4 331 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 LINC00322Q6ZN03 302 aaPredicted RBP4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 TMEM144Q7Z5S9 345 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 STX12Q86Y82 276 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 OR8I2Q8N0Y5 310 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 GBGT1Q8N5D6 347 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 MITD1Q8WV92 249 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 SMIM8Q96KF7 97 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 TMEM147Q9BVK8 224 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 MFFQ9GZY8 342 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 C20orf85Q9H1P6 137 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 ZFAND3Q9H8U3 227 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 NPVFQ9HCQ7 196 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 NRN1Q9NPD7 142 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 GSKIPQ9P0R6 139 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 KLK5Q9Y337 293 aaPredicted RBP4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 STARD9Q9P2P6 4700 aa4.18□□□□□ -1.74
CLSTN3-215ENST00000544584 IGHV3OR16-13A0A075B7E8 117 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 IGHV3-49A0A0A0MS15 119 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 IGHV3-74A0A0B4J1X5 117 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 NUPR2A6NF83 97 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 GOSR2O14653 212 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 BUB3O43684 328 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 TSC22D2O75157 780 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 HYPMO75409 117 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 SCGB1D2O95969 90 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 CA1P00915 261 aaPredicted RBP4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 IL5P05113 134 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 H2AFB2P0C5Z0 115 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 PSG1P11464 419 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 RPL35AP18077 110 aaKnown RBP4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 RPL7P18124 248 aaKnown RBP4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 BCAP31P51572 246 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 DEFB131AP59861 70 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 DLK1P80370 383 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 ID3Q02535 119 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms