RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 SCRT1Q9BWW7 348 aa19.77■□□□□ 0.76
PDCD2-211ENST00000544336 DEFB1P60022 68 aa19.76■□□□□ 0.75
PDCD2-211ENST00000544336 CLVS1Q8IUQ0 354 aaPredicted RBP19.76■□□□□ 0.75
PDCD2-211ENST00000544336 PRRT1Q99946 306 aa19.76■□□□□ 0.75
PDCD2-211ENST00000544336 IGKV3-20P01619 116 aa19.75■□□□□ 0.75
PDCD2-211ENST00000544336 FXYD7P58549 80 aa19.75■□□□□ 0.75
PDCD2-211ENST00000544336 SPCS2Q15005 226 aa19.75■□□□□ 0.75
PDCD2-211ENST00000544336 RNF125Q96EQ8 232 aa19.75■□□□□ 0.75
PDCD2-211ENST00000544336 AMBPP02760 352 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 HLA-DRB4P13762 266 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 GDF5OSQ5U4N7 250 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 LGI3Q8N145 548 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 DTD1Q8TEA8 209 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 DIRAS2Q96HU8 199 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 RBKSQ9H477 322 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 SEPSECSQ9HD40 501 aaKnown RBP19.74■□□□□ 0.75
PDCD2-211ENST00000544336 KCNIP3Q9Y2W7 256 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 HLA-DRB4X5D2U9 266 aa19.74■□□□□ 0.75
PDCD2-211ENST00000544336 GSG1LQ6UXU4 331 aa19.73■□□□□ 0.75
PDCD2-211ENST00000544336 IL22RA2Q969J5 263 aa19.73■□□□□ 0.75
PDCD2-211ENST00000544336 LINC00052Q96N35 136 aa19.73■□□□□ 0.75
PDCD2-211ENST00000544336 IGHV3OR16-12A0A075B7B8 117 aa19.72■□□□□ 0.75
PDCD2-211ENST00000544336 NKX2-1P43699 371 aaPredicted RBP19.72■□□□□ 0.75
PDCD2-211ENST00000544336 EMP1P54849 157 aa19.72■□□□□ 0.75
PDCD2-211ENST00000544336 KLF9Q13886 244 aaPredicted RBP19.72■□□□□ 0.75
PDCD2-211ENST00000544336 LYZL2Q7Z4W2 148 aa19.72■□□□□ 0.75
PDCD2-211ENST00000544336 GPR141Q7Z602 305 aa19.72■□□□□ 0.75
PDCD2-211ENST00000544336 NDUFAF3Q9BU61 184 aa19.72■□□□□ 0.75
PDCD2-211ENST00000544336 HSPB7Q9UBY9 170 aa19.72■□□□□ 0.75
PDCD2-211ENST00000544336 CACFD1Q9UGQ2 172 aa19.72■□□□□ 0.75
PDCD2-211ENST00000544336 U3KQ87 197 aa19.72■□□□□ 0.75
PDCD2-211ENST00000544336 ZFP92A6NM28 416 aa19.71■□□□□ 0.75
PDCD2-211ENST00000544336 AKR1C4P17516 323 aa19.71■□□□□ 0.75
PDCD2-211ENST00000544336 CCR6P51684 374 aa19.71■□□□□ 0.75
PDCD2-211ENST00000544336 ZNF90Q03938 601 aa19.71■□□□□ 0.75
PDCD2-211ENST00000544336 SMCO1Q147U7 214 aa19.71■□□□□ 0.75
PDCD2-211ENST00000544336 WDR12Q9GZL7 423 aaKnown RBP19.71■□□□□ 0.75
PDCD2-211ENST00000544336 KIAA1109Q2LD37 5005 aa19.71■□□□□ 0.75
PDCD2-211ENST00000544336 CTDSPLO15194 276 aa19.7■□□□□ 0.74
PDCD2-211ENST00000544336 MCUBQ9NWR8 336 aa19.7■□□□□ 0.74
PDCD2-211ENST00000544336 ANKRD20A5PA0PJZ0 165 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 M0R2N4 97 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 P0DMU3 169 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 FAM231AP0DMU4 169 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 FAM231CP0DMU5 169 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 NUP62P37198 522 aaPredicted RBP19.69■□□□□ 0.74
PDCD2-211ENST00000544336 LYZP61626 148 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 ZNF705AQ6ZN79 300 aaPredicted RBP19.69■□□□□ 0.74
PDCD2-211ENST00000544336 LINC00336Q6ZUF6 198 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 POM121L12Q8N7R1 296 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 SLC35E1Q96K37 410 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 SCP2D1Q9UJQ7 156 aa19.69■□□□□ 0.74
PDCD2-211ENST00000544336 A0A0B4J2A0 478 aa19.68■□□□□ 0.74
PDCD2-211ENST00000544336 GAMTQ14353 236 aa19.68■□□□□ 0.74
PDCD2-211ENST00000544336 OR8G2PQ6IF36 304 aa19.68■□□□□ 0.74
PDCD2-211ENST00000544336 OR4B1Q8NGF8 309 aa19.68■□□□□ 0.74
PDCD2-211ENST00000544336 OR1S1Q8NH92 325 aa19.68■□□□□ 0.74
PDCD2-211ENST00000544336 MRPS26Q9BYN8 205 aaKnown RBP19.68■□□□□ 0.74
PDCD2-211ENST00000544336 SHPKQ9UHJ6 478 aa19.68■□□□□ 0.74
PDCD2-211ENST00000544336 PFDN2Q9UHV9 154 aa19.68■□□□□ 0.74
PDCD2-211ENST00000544336 IGKV1D-37A0A075B6S9 117 aa19.67■□□□□ 0.74
PDCD2-211ENST00000544336 SPART-AS1P0CW21 52 aa19.67■□□□□ 0.74
PDCD2-211ENST00000544336 ID1P41134 155 aa19.67■□□□□ 0.74
PDCD2-211ENST00000544336 SUPT4H1P63272 117 aaKnown RBP19.67■□□□□ 0.74
PDCD2-211ENST00000544336 COQ8AQ8NI60 647 aa19.67■□□□□ 0.74
PDCD2-211ENST00000544336 SCGB3A2Q96PL1 93 aa19.67■□□□□ 0.74
PDCD2-211ENST00000544336 SAV1Q9H4B6 383 aaPredicted RBP19.67■□□□□ 0.74
PDCD2-211ENST00000544336 ZNF705FA8MVS1 300 aaPredicted RBP19.66■□□□□ 0.74
PDCD2-211ENST00000544336 ZNF705DP0CH99 300 aaPredicted RBP19.66■□□□□ 0.74
PDCD2-211ENST00000544336 ZNF705BP0CI00 300 aaPredicted RBP19.66■□□□□ 0.74
PDCD2-211ENST00000544336 OR2F1Q13607 317 aa19.66■□□□□ 0.74
PDCD2-211ENST00000544336 PPP1R14BQ96C90 147 aa19.66■□□□□ 0.74
PDCD2-211ENST00000544336 NEU1Q99519 415 aa19.66■□□□□ 0.74
PDCD2-211ENST00000544336 GPX4P36969 197 aaPredicted RBP19.65■□□□□ 0.74
PDCD2-211ENST00000544336 ALDH3B2P48448 385 aa19.65■□□□□ 0.74
PDCD2-211ENST00000544336 FOXI2Q6ZQN5 318 aa19.65■□□□□ 0.74
PDCD2-211ENST00000544336 SLC35B3Q9H1N7 401 aa19.65■□□□□ 0.74
PDCD2-211ENST00000544336 RABL2AQ9UBK7 228 aaPredicted RBP19.65■□□□□ 0.74
PDCD2-211ENST00000544336 RABL2BQ9UNT1 228 aa19.65■□□□□ 0.74
PDCD2-211ENST00000544336 ANXA3P12429 323 aa19.64■□□□□ 0.73
PDCD2-211ENST00000544336 PSMB3P49720 205 aa19.64■□□□□ 0.73
PDCD2-211ENST00000544336 CCDC59Q9P031 241 aaKnown RBP19.64■□□□□ 0.73
PDCD2-211ENST00000544336 PAIP2BQ9ULR5 123 aaKnown RBP19.64■□□□□ 0.73
PDCD2-211ENST00000544336 RFNGQ9Y644 331 aa19.64■□□□□ 0.73
PDCD2-211ENST00000544336 DNAH2Q9P225 4427 aa19.63■□□□□ 0.73
PDCD2-211ENST00000544336 FAT2Q9NYQ8 4349 aa19.63■□□□□ 0.73
PDCD2-211ENST00000544336 TMEM189A5PLL7 270 aa19.63■□□□□ 0.73
PDCD2-211ENST00000544336 SMIM9A6NGZ8 99 aa19.63■□□□□ 0.73
PDCD2-211ENST00000544336 F6UB75 175 aa19.63■□□□□ 0.73
PDCD2-211ENST00000544336 ZNF709Q8N972 641 aa19.63■□□□□ 0.73
PDCD2-211ENST00000544336 DYNC2LI1Q8TCX1 351 aa19.63■□□□□ 0.73
PDCD2-211ENST00000544336 A0A1B0GVY2 172 aa19.62■□□□□ 0.73
PDCD2-211ENST00000544336 SOCS3O14543 225 aa19.62■□□□□ 0.73
PDCD2-211ENST00000544336 FABP1P07148 127 aa19.62■□□□□ 0.73
PDCD2-211ENST00000544336 IAPPP10997 89 aa19.62■□□□□ 0.73
PDCD2-211ENST00000544336 SRPXP78539 464 aa19.62■□□□□ 0.73
PDCD2-211ENST00000544336 PLA2G2EQ9NZK7 142 aa19.62■□□□□ 0.73
PDCD2-211ENST00000544336 RSL24D1Q9UHA3 163 aaKnown RBP19.62■□□□□ 0.73
PDCD2-211ENST00000544336 PRSS29PA6NIE9 313 aa19.61■□□□□ 0.73
PDCD2-211ENST00000544336 SNRPGP15A8MWD9 76 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms